RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	ERVK-7	P63135	1459 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	MYH4	Q9Y623	1939 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		A0A0G2JND7	137 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		G3V318	75 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	UQCRH	P07919	91 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	GCHFR	P30047	84 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	COX17	Q14061	63 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PEA15	Q15121	130 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	FAM223A	Q8IWN6	122 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	HIGD1B	Q9P298	99 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	LINC01558	Q9Y6Z2	57 aa		0.94	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	CACNA1A	O00555	2505 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	KDM3B	Q7LBC6	1761 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		A0A1B0GWA3	101 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	ZNF815P	A8K554	130 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	CYB5A	P00167	134 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	MGP	P08493	103 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	SAA2	P0DJI9	122 aa	Predicted RBP	0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	SPINT3	P49223	89 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	SMIM11B	Q8TCY0	68 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	SPRR4	Q96PI1	79 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PLXNB2	O15031	1838 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PKD1L2	Q7Z442	2459 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	LAMC1	P11047	1609 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	RAPGEF6	Q8TEU7	1601 aa		0.93	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	TRBV25-1	A0A075B6N4	114 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	FAM223B	A6NKX1	122 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		H3BQF6	201 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	CFAP126	Q5VTH2	177 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	ZNF720	Q7Z2F6	126 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	S100A16	Q96FQ6	103 aa	Known RBP	0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	S100A13	Q99584	98 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PRR15L	Q9BU68	103 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	RABAC1	Q9UI14	185 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	LRRC37A2	A6NM11	1700 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	IQSEC2	Q5JU85	1478 aa		0.92	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	SHPRH	Q149N8	1683 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	UACA	Q9BZF9	1416 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	DCAF1	Q9Y4B6	1507 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		M0R3E3	92 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	S100A3	P33764	101 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PSMG4	Q5JS54	123 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538		Q6ZRX8	168 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	LINC01600	Q96MT4	127 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	ZDBF2	Q9HCK1	2354 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	CACNA1C	Q13936	2221 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PAPPA2	Q9BXP8	1791 aa		0.91	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	EDC4	Q6P2E9	1401 aa	Known RBP	0.9	□□□□□ -2.26
CDC42BPA-211	ENST00000466538	PIN1P1	O15428	100 aa		0.9	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	SPINK9	Q5DT21	86 aa		0.9	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	PLAC8	Q9NZF1	115 aa		0.9	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	PLIN4	Q96Q06	1357 aa		0.9	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	PPRC1	Q5VV67	1664 aa	Known RBP	0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	C7orf77	A4D0Y5	90 aa		0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	BCE1	O60756	84 aa		0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	HMGN3	Q15651	99 aa		0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	TARBP1	Q13395	1621 aa	Known RBP	0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	NOTCH1	P46531	2555 aa		0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	NEXMIF	Q5QGS0	1516 aa		0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.89	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	CAD	P27708	2225 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	KNTC1	P50748	2209 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	KANTR	A0A1W2PQU2	76 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	HAMP	P81172	84 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ADIRF	Q15847	76 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ETDB	Q3ZM63	59 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ALKAL2	Q6UX46	152 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	UBE2DNL	Q8IWF7	75 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	FDCSP	Q8NFU4	85 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	PROK2	Q9HC23	129 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	CRYBG1	Q9Y4K1	1723 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ALK	Q9UM73	1620 aa		0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	RRBP1	Q9P2E9	1410 aa	Known RBP	0.88	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	DNMBP	Q6XZF7	1577 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	CFAP74	Q9C0B2	1584 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	CCDC88B	A6NC98	1476 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	KNDC1	Q76NI1	1749 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	FBN2	P35556	2912 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	MYO7A	Q13402	2215 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538		D6R8Y8	96 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	LEPROTL1	O95214	131 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538		Q6JHZ5	121 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	MUSTN1	Q8IVN3	82 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	TMEM263	Q8WUH6	116 aa	Known RBP	0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	PSENEN	Q9NZ42	101 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ABCC2	Q92887	1545 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	LTN1	O94822	1766 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	KIF20B	Q96Q89	1820 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ABCA8	O94911	1581 aa		0.87	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ZFHX3	Q15911	3703 aa		0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538		F8WEM9	126 aa		0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	ACYP1	P07311	99 aa		0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	SNRPF	P62306	86 aa	Known RBP	0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	WFDC2	Q14508	124 aa		0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	C10orf95	Q9H7T3	257 aa		0.86	□□□□□ -2.27
CDC42BPA-211	ENST00000466538	LINC00846	Q9NV44	126 aa		0.86	□□□□□ -2.27

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