RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 TRGV1A0A0A0MS02 117 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 TMEM238C9JI98 176 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 H7C423 109 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 K7ERU9 68 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 INSL3P51460 131 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 UBE2D3P61077 147 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 UBE2D2P62837 147 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 LYRM7Q5U5X0 104 aa5.82□□□□□ -1.48
LSG1-206ENST00000466391 NAA38Q9BRA0 125 aaKnown RBP5.82□□□□□ -1.48
LSG1-206ENST00000466391 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
LSG1-206ENST00000466391 NIPBLQ6KC79 2804 aaeCLIP5.82□□□□□ -1.48
LSG1-206ENST00000466391 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 TRBV6-4A0A1B0GX49 114 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 F8W1H4 67 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 TIMM17BO60830 172 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 Q6ZTI0 123 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 Q6ZUT4 128 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 SMIM29Q86T20 159 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 DEFB104AQ8WTQ1 72 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 Q9UF83 564 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 WNK1Q9H4A3 2382 aa5.81□□□□□ -1.48
LSG1-206ENST00000466391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.8□□□□□ -1.48
LSG1-206ENST00000466391 A0A0J9YXY3 114 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 IGKV2-29A2NJV5 120 aaPredicted RBP5.8□□□□□ -1.48
LSG1-206ENST00000466391 LINC00694P0DN24 101 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 HERVK_113P63121 156 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
LSG1-206ENST00000466391 ZFAND6Q6FIF0 208 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 C10orf126Q8N4M7 172 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 VSIG2Q96IQ7 327 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 LITAFQ99732 161 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
LSG1-206ENST00000466391 ZNF469Q96JG9 3925 aaPredicted RBP5.8□□□□□ -1.48
LSG1-206ENST00000466391 IGHV3OR16-12A0A075B7B8 117 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
LSG1-206ENST00000466391 TSPAN13O95857 204 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 LY6G6DO95868 133 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 CFC1P0CG37 223 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 KRTAP10-3P60369 221 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 KIR2DL5BQ8NHK3 375 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 NOP10Q9NPE3 64 aaKnown RBP5.79□□□□□ -1.48
LSG1-206ENST00000466391 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
LSG1-206ENST00000466391 ACANP16112 2415 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 HIVEP2P31629 2446 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 TRBV20-1A0A075B6N2 111 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 IGHV3-38A0A0C4DH36 116 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 IFITM1P13164 125 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 CFAP161Q6P656 301 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 CEMP1Q6PRD7 247 aaPredicted RBP5.78□□□□□ -1.48
LSG1-206ENST00000466391 NTM-AS1Q6ZSK4 140 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 GEMIN7Q9H840 131 aaKnown RBP5.78□□□□□ -1.48
LSG1-206ENST00000466391 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
LSG1-206ENST00000466391 G3V4G9 280 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 NDUFA1O15239 70 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 RPL35AP18077 110 aaKnown RBP5.77□□□□□ -1.49
LSG1-206ENST00000466391 C9orf66Q5T8R8 295 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 ATP6V0E2Q8NHE4 81 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 WFDC10AQ9H1F0 79 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 CDC42SE2Q9NRR3 84 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
LSG1-206ENST00000466391 DNHD1Q96M86 4753 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 TRGV2A0A075B6R0 118 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 TRAV8-3A0A0A6YYJ7 113 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 A4D1N5 150 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 M0QXV9 152 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 GAGE5Q13069 117 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 GAGE6Q13070 117 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 MIAQ16674 131 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 LINC00242Q5T6M2 205 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
LSG1-206ENST00000466391 A0A087WYN8 130 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 APOMO95445 188 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 SPINK8P0C7L1 97 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
LSG1-206ENST00000466391 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 TMEM101Q96IK0 257 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 SMR3AQ99954 134 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
LSG1-206ENST00000466391 IGHV3-64A0A075B6Q5 118 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 TRGV4A0A0C4DH28 118 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 TRBV30A0A0K0K1B3 111 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 F5H768 121 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 H3BMG7 143 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 HERV-K104P63124 156 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 GAGE2BQ13066 116 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 GAGE2EQ4V326 116 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.74□□□□□ -1.49
LSG1-206ENST00000466391 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
LSG1-206ENST00000466391 GAGE2DQ9UEU5 116 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms