RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 LRRC37A5PQ49AS3 106 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 COX8CQ7Z4L0 72 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 OR10AG1Q8NH19 301 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 APCSP02743 223 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 OR5AL1P0C617 328 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 DEFA3P59666 94 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 SSTP61278 116 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 Q86TA4 180 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 FAM19A2Q8N3H0 131 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 OR10D4PQ8NGN7 298 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 SMDT1Q9H4I9 107 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 TMEM167BQ9NRX6 74 aa3.2□□□□□ -1.9
NCL-208ENST00000466274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.19□□□□□ -1.9
NCL-208ENST00000466274 MUC21A0A140T8X8 626 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 IGKV2-29A2NJV5 120 aaPredicted RBP3.19□□□□□ -1.9
NCL-208ENST00000466274 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 SNAI2O43623 268 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 IL7P13232 177 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 UBE2AP49459 152 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 PCOTHQ58A44 107 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 SMIM3Q9BZL3 60 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 CYTL1Q9NRR1 136 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 NUDT15Q9NV35 164 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 ALG5Q9Y673 324 aa3.19□□□□□ -1.9
NCL-208ENST00000466274 PEX7O00628 323 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 SPINK1P00995 79 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 STAG3L2P0CL84 134 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 STAG3L3P0CL85 134 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 NTF3P20783 257 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 GCHFRP30047 84 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 H2BFSP57053 126 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 UBE2G1P62253 170 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 CNPY1Q3B7I2 92 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 NKX6-2Q9C056 277 aaPredicted RBP3.18□□□□□ -1.9
NCL-208ENST00000466274 C22orf24Q9Y442 160 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 HSPB11Q9Y547 144 aa3.18□□□□□ -1.9
NCL-208ENST00000466274 A0A1W2PRE2 83 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 CXorf1O96002 111 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 CTRLP40313 264 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 CDC34P49427 236 aaPredicted RBP3.17□□□□□ -1.9
NCL-208ENST00000466274 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 SMAGPQ0VAQ4 97 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 ZNF726P1Q15940 193 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 TRIQKQ629K1 86 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 PACRGQ96M98 296 aaPredicted RBP3.17□□□□□ -1.9
NCL-208ENST00000466274 FAM210AQ96ND0 272 aa3.17□□□□□ -1.9
NCL-208ENST00000466274 NEBP20929 6669 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 NDUFC2-KCTD14E9PQ53 114 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 LYRM1O43325 122 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 TRGC1P0CF51 173 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 C5orf38Q86SI9 138 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 CDC42SE2Q9NRR3 84 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 TP73-AS1Q9UF72 201 aa3.16□□□□□ -1.9
NCL-208ENST00000466274 TRBV30A0A0K0K1B3 111 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 CENPXA8MT69 81 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 LTAP01374 205 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 MBP02144 154 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 LYZL1Q6UWQ5 148 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 UNQ6190/PRO20217Q6UXQ8 127 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.91
NCL-208ENST00000466274 MRPL52Q86TS9 123 aaKnown RBP3.15□□□□□ -1.91
NCL-208ENST00000466274 PPP1R1CQ8WVI7 109 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 MRAP2Q96G30 205 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 TPPP3Q9BW30 176 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 PYGO1Q9Y3Y4 419 aa3.15□□□□□ -1.91
NCL-208ENST00000466274 TRAV13-1A0A0B4J241 112 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 FAM74A7A6NL05 159 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 I3L3M4 83 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 SLC25A20O43772 301 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 PMCHP20382 165 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 UBE2G2P60604 165 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
NCL-208ENST00000466274 ADAMTSL4-AS1Q5T5F5 129 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 CST9LP1Q5W188 147 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 TCEAL7Q9BRU2 100 aa3.14□□□□□ -1.91
NCL-208ENST00000466274 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
NCL-208ENST00000466274 F2Z2F3 143 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 MPC2O95563 127 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 ATP6V0CP27449 155 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 S100A5P33763 92 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 TEX261Q6UWH6 196 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 C3orf22Q8N5N4 141 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 GNB1LQ9BYB4 327 aa3.13□□□□□ -1.91
NCL-208ENST00000466274 ZNF727A8MUV8 499 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 S100A9P06702 114 aaKnown RBP3.12□□□□□ -1.91
NCL-208ENST00000466274 RPS20P60866 119 aaKnown RBP3.12□□□□□ -1.91
NCL-208ENST00000466274 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
NCL-208ENST00000466274 KRTAP13-1Q8IUC0 172 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 Q8NBF4 154 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 STOML3Q8TAV4 291 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 MARVELD1Q9BSK0 173 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 CCDC32Q9BV29 185 aa3.12□□□□□ -1.91
NCL-208ENST00000466274 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
NCL-208ENST00000466274 CSDC2Q9Y534 153 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms