RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 DCHS2Q6V1P9 2916 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 MUC12Q9UKN1 5478 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 MAP1BP46821 2468 aaKnown RBP-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 EHBP1L1Q8N3D4 1523 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 ARHGEF12Q9NZN5 1544 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 PSME4Q14997 1843 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 COL6A3P12111 3177 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 K7EQZ3 153 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 COX6B1P14854 86 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 SPRR1BP22528 89 aa-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 ROCK2O75116 1388 aaKnown RBP-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 KTN1Q86UP2 1357 aaKnown RBP-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 MAGI1Q96QZ7 1491 aaPredicted RBP-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 KDM5AP29375 1690 aaKnown RBP-0.38□□□□□ -2.47
NUCKS1-202ENST00000464938 MYOM2P54296 1465 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 MRC2Q9UBG0 1479 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 FXYD6-FXYD2A0A087WZ82 144 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 IFNGP01579 166 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 AKAIN1P0CW23 69 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 MRPL54Q6P161 138 aaKnown RBP-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 TMEM263Q8WUH6 116 aaKnown RBP-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 FAM167A-AS1Q96KT0 104 aa-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
NUCKS1-202ENST00000464938 WNK1Q9H4A3 2382 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 PKHD1P08F94 4074 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 TSC2P49815 1807 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 UBE2L5PA0A1B0GUS4 154 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 CHKB-CPT1BH3BT56 60 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 MGPP08493 103 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 IGLC1P0CG04 106 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 UBE2L3P68036 154 aaKnown RBP-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 C10orf113Q5VZT2 155 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 NXT2Q9NPJ8 142 aaKnown RBP-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 KIAA0556O60303 1618 aa-0.4□□□□□ -2.47
NUCKS1-202ENST00000464938 CHD8Q9HCK8 2581 aa-0.41□□□□□ -2.47
NUCKS1-202ENST00000464938 GOLGA4Q13439 2230 aaKnown RBP-0.41□□□□□ -2.47
NUCKS1-202ENST00000464938 ATP5EP56381 51 aaPredicted RBP-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 UBE2D3P61077 147 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 UBE2D2P62837 147 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 C9orf153Q5TBE3 101 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 FAM223AQ8IWN6 122 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 DPH3P1Q9H4G8 78 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 SCN7AQ01118 1682 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 BTAF1O14981 1849 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 SETXQ7Z333 2677 aaKnown RBP-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 ADGRL2O95490 1459 aa-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 POLA1P09884 1462 aaPredicted RBP-0.41□□□□□ -2.48
NUCKS1-202ENST00000464938 ACANP16112 2415 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 TRBV7-4A0A0J9YYF1 115 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 LINC00959A0A1B0GUT2 108 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 EFCAB10A6NFE3 127 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 RPL13AP3Q6NVV1 102 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 UQCR10Q9UDW1 63 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 IER3IP1Q9Y5U9 82 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 SCAPERQ9BY12 1400 aa-0.42□□□□□ -2.48
NUCKS1-202ENST00000464938 DLEU1O43261 78 aa-0.43□□□□□ -2.48
NUCKS1-202ENST00000464938 WHAMMP3Q1A5X7 153 aa-0.43□□□□□ -2.48
NUCKS1-202ENST00000464938 C1orf167Q5SNV9 1468 aa-0.43□□□□□ -2.48
NUCKS1-202ENST00000464938 EIF4G3O43432 1585 aaKnown RBP-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 URB1O60287 2271 aaKnown RBP-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 FLNBO75369 2602 aaKnown RBP-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 NRKQ7Z2Y5 1582 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 A0A1B0GV90 55 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 F6UZH7 168 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 Q0VG73 95 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 LINC01600Q96MT4 127 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 FAIMQ9NVQ4 179 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 ARL2-SNX15V9GYD0 113 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 PDZD2O15018 2839 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 MAPKBP1O60336 1514 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 ARHGAP5Q13017 1502 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 SPHKAPQ2M3C7 1700 aa-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 XRN1Q8IZH2 1706 aaKnown RBP-0.44□□□□□ -2.48
NUCKS1-202ENST00000464938 TOP2BQ02880 1626 aa-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 GNG11P61952 73 aa-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 KRTAP19-7Q3SYF9 63 aa-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 FLGP20930 4061 aaPredicted RBP-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 NUP188Q5SRE5 1749 aa-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 SETBP1Q9Y6X0 1596 aa-0.45□□□□□ -2.48
NUCKS1-202ENST00000464938 COL4A6Q14031 1691 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 PZPP20742 1482 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 IQSEC2Q5JU85 1478 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 A0A0G2JMZ2 1700 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 DNAJC13O75165 2243 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 FAM24AA6NFZ4 105 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 FAM223BA6NKX1 122 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 COX6CP09669 75 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 GNG4P50150 75 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 LCN9Q8WX39 176 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 TOPAZ1Q8N9V7 1692 aa-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
NUCKS1-202ENST00000464938 PLEKHH2Q8IVE3 1493 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 H3BQ15 152 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 CORTO00230 105 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 SPINK4O60575 86 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 SNAPC5O75971 98 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 UBA52P62987 128 aaKnown RBP-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 C2orf88Q9BSF0 95 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 PRO1933Q9H354 126 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms