RNA–Protein interactions for RNA: ENST00000463727.1

PTPRE-205, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best)

Gene PTPRE, Length 3,944 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-205ENST00000463727 C11orf72Q8NBR9 251 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 A0A096LPF7 62 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 CRLF1O75462 422 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 MTORP42345 2549 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 FN1P02751 2386 aaKnown RBP7.51□□□□□ -1.21
PTPRE-205ENST00000463727 J3QKU1 62 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
PTPRE-205ENST00000463727 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
PTPRE-205ENST00000463727 Q9HAA7 133 aa7.5□□□□□ -1.21
PTPRE-205ENST00000463727 IGSF10Q6WRI0 2623 aa7.5□□□□□ -1.21
PTPRE-205ENST00000463727 JMJD1CQ15652 2540 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 H0YGX0 51 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 GYPEP15421 78 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 WFDC11Q8NEX6 87 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
PTPRE-205ENST00000463727 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 TRBV6-4A0A1B0GX49 114 aa7.49□□□□□ -1.21
PTPRE-205ENST00000463727 LOC100131303A0A0U1RQF7 123 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 TRACP01848 142 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 WFDC10AQ9H1F0 79 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
PTPRE-205ENST00000463727 SVEP1Q4LDE5 3571 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
PTPRE-205ENST00000463727 LITAFQ99732 161 aa7.47□□□□□ -1.21
PTPRE-205ENST00000463727 FLNCQ14315 2725 aa7.47□□□□□ -1.21
PTPRE-205ENST00000463727 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
PTPRE-205ENST00000463727 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.21
PTPRE-205ENST00000463727 LINC00643Q86TS7 51 aa7.46□□□□□ -1.21
PTPRE-205ENST00000463727 LECT2O14960 151 aa7.46□□□□□ -1.21
PTPRE-205ENST00000463727 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.21
PTPRE-205ENST00000463727 FHL3Q13643 280 aa7.46□□□□□ -1.21
PTPRE-205ENST00000463727 Q8N2B8 174 aa7.46□□□□□ -1.21
PTPRE-205ENST00000463727 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.22
PTPRE-205ENST00000463727 IGLV5-39A0A0G2JS06 123 aa7.46□□□□□ -1.22
PTPRE-205ENST00000463727 FAM240AA0A1B0GVK7 77 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 ATP5G1P05496 136 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 LINC01006Q8NI28 216 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 HIST1H4AP62805 103 aaKnown RBP7.45□□□□□ -1.22
PTPRE-205ENST00000463727 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 DAD1P61803 113 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 Q6Q795 121 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
PTPRE-205ENST00000463727 ACANP16112 2415 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 A8MTW9 85 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 ZNF843Q8N446 348 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 ORMDL1Q9P0S3 153 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 FSHBP01225 129 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 IGLV10-54A0A075B6I4 117 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
PTPRE-205ENST00000463727 F5H768 121 aa7.43□□□□□ -1.22
PTPRE-205ENST00000463727 PRO0255Q9UI72 69 aa7.43□□□□□ -1.22
PTPRE-205ENST00000463727 USP24Q9UPU5 2620 aa7.43□□□□□ -1.22
PTPRE-205ENST00000463727 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-205ENST00000463727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-205ENST00000463727 UTP20O75691 2785 aaKnown RBP7.43□□□□□ -1.22
PTPRE-205ENST00000463727 ESM1Q9NQ30 184 aa7.42□□□□□ -1.22
PTPRE-205ENST00000463727 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
PTPRE-205ENST00000463727 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
PTPRE-205ENST00000463727 A0A096LNT2 108 aa7.42□□□□□ -1.22
PTPRE-205ENST00000463727 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 CITED1Q99966 193 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 VPS13CQ709C8 3753 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 C3orf56Q8N813 242 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 CCL18P55774 89 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
PTPRE-205ENST00000463727 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
PTPRE-205ENST00000463727 SOSTDC1Q6X4U4 206 aa7.4□□□□□ -1.22
PTPRE-205ENST00000463727 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
PTPRE-205ENST00000463727 DEFB4AO15263 64 aa7.4□□□□□ -1.22
PTPRE-205ENST00000463727 IGLV1-51P01701 117 aa7.4□□□□□ -1.23
PTPRE-205ENST00000463727 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.23
PTPRE-205ENST00000463727 IMUPQ9GZP8 106 aa7.4□□□□□ -1.23
PTPRE-205ENST00000463727 APOC4P55056 127 aa7.39□□□□□ -1.23
PTPRE-205ENST00000463727 PLA2G2AP14555 144 aa7.39□□□□□ -1.23
PTPRE-205ENST00000463727 SLPIP03973 132 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 DEFB135Q30KP9 77 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 BBC3Q96PG8 261 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-205ENST00000463727 TMEM126AQ9H061 195 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 A0A087WZ39 114 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 FHL2Q14192 279 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
PTPRE-205ENST00000463727 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
PTPRE-205ENST00000463727 GHRHP01286 108 aa7.37□□□□□ -1.23
PTPRE-205ENST00000463727 CXCL5P42830 114 aa7.37□□□□□ -1.23
PTPRE-205ENST00000463727 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
PTPRE-205ENST00000463727 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
PTPRE-205ENST00000463727 ATOX1O00244 68 aa7.36□□□□□ -1.23
PTPRE-205ENST00000463727 JMJD7-PLA2G4BH0Y9G9 81 aa7.36□□□□□ -1.23
PTPRE-205ENST00000463727 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
PTPRE-205ENST00000463727 CELSR2Q9HCU4 2923 aa7.36□□□□□ -1.23
PTPRE-205ENST00000463727 SMIM9A6NGZ8 99 aa7.36□□□□□ -1.23
PTPRE-205ENST00000463727 NCR3O14931 201 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms