RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 PPIP5K1Q6PFW1 1433 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 NRKQ7Z2Y5 1582 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 KIF21BO75037 1637 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 BCORL1Q5H9F3 1711 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 CACNA1EQ15878 2313 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 TACC2O95359 2948 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 TRPM7Q96QT4 1865 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 LRRC37A3O60309 1634 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 ZFYVE16Q7Z3T8 1539 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 ABCC10Q5T3U5 1492 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 C10orf71Q711Q0 1435 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 Q8N6K4 173 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 LENEPQ9Y5L5 61 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 ASCC3Q8N3C0 2202 aaKnown RBP1.27□□□□□ -2.21
HERC4-208ENST00000463478 ZGRF1Q86YA3 2104 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 ATG2AQ2TAZ0 1938 aa1.27□□□□□ -2.21
HERC4-208ENST00000463478 TMEM131LA2VDJ0 1609 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 MADDQ8WXG6 1647 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 CASKIN1Q8WXD9 1431 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 A0A087WTM6 91 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 CLPSL1A2RUU4 121 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
HERC4-208ENST00000463478 C10orf128Q5T292 105 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 Q5VV11 94 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 LAMA5O15230 3695 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 CASP8AP2Q9UKL3 1982 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 MYH7P12883 1935 aa1.26□□□□□ -2.21
HERC4-208ENST00000463478 SPTBN1Q01082 2364 aaKnown RBP1.26□□□□□ -2.21
HERC4-208ENST00000463478 KIAA0100Q14667 2235 aaKnown RBP1.25□□□□□ -2.21
HERC4-208ENST00000463478 MED12Q93074 2177 aa1.25□□□□□ -2.21
HERC4-208ENST00000463478 MYH9P35579 1960 aaKnown RBP1.25□□□□□ -2.21
HERC4-208ENST00000463478 LOC285095A0A1B0GVY8 99 aa1.25□□□□□ -2.21
HERC4-208ENST00000463478 M0R143 59 aa1.25□□□□□ -2.21
HERC4-208ENST00000463478 MGST2Q99735 147 aa1.25□□□□□ -2.21
HERC4-208ENST00000463478 RREB1Q92766 1687 aa1.25□□□□□ -2.21
HERC4-208ENST00000463478 CNTLNQ9NXG0 1405 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 KRTDAPP60985 99 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 SPINK9Q5DT21 86 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 WFDC6Q9BQY6 131 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 R4GMQ9 66 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 EFCAB6Q5THR3 1501 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 RALGAPBQ86X10 1494 aa1.24□□□□□ -2.21
HERC4-208ENST00000463478 TET3O43151 1660 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 CUL7Q14999 1698 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 CADP27708 2225 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 DLG5Q8TDM6 1919 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 TRBV7-3A0A075B6L6 115 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 NAP1L6A6NFF2 107 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 LINC00032P0C843 101 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 C6orf52Q5T4I8 152 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 AMELXQ99217 191 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 BPESC1Q9GZL8 116 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 AP4S1Q9Y587 144 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 MYOM1P52179 1685 aa1.23□□□□□ -2.21
HERC4-208ENST00000463478 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
HERC4-208ENST00000463478 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 F2Z2F3 143 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 BAGE3Q86Y29 109 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 SNRNP200O75643 2136 aaKnown RBP1.22□□□□□ -2.21
HERC4-208ENST00000463478 LRP6O75581 1613 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 ABCA4P78363 2273 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
HERC4-208ENST00000463478 LAMA1P25391 3075 aa1.21□□□□□ -2.21
HERC4-208ENST00000463478 RBBP6Q7Z6E9 1792 aaKnown RBP1.21□□□□□ -2.22
HERC4-208ENST00000463478 ARHGAP5Q13017 1502 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 CDK13Q14004 1512 aaKnown RBP1.21□□□□□ -2.22
HERC4-208ENST00000463478 ZMYM4Q5VZL5 1548 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 PPP1R17O96001 155 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 PKIAP61925 76 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 VMO1Q7Z5L0 202 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 FAM167A-AS1Q96KT0 104 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 DYNLRB1Q9NP97 96 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 SCAPERQ9BY12 1400 aa1.21□□□□□ -2.22
HERC4-208ENST00000463478 MUC22E2RYF6 1773 aaPredicted RBP1.21□□□□□ -2.22
HERC4-208ENST00000463478 NCOA6Q14686 2063 aaPredicted RBP1.2□□□□□ -2.22
HERC4-208ENST00000463478 CCL18P55774 89 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 SMIM11BQ8TCY0 68 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 Q96NJ1 140 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 UQCR10Q9UDW1 63 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 DIP2AQ14689 1571 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 NRXN2Q9P2S2 1712 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 CITO14578 2027 aa1.2□□□□□ -2.22
HERC4-208ENST00000463478 TEX14Q8IWB6 1497 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 CHD1O14646 1710 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 SPINT3P49223 89 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 SMARCA2P51531 1590 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 GNG11P61952 73 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 COL5A1-AS1Q5SY13 56 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 DPY30Q9C005 99 aa1.19□□□□□ -2.22
HERC4-208ENST00000463478 ABCA3Q99758 1704 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 NWD2Q9ULI1 1742 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
HERC4-208ENST00000463478 UNC13BO14795 1591 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 ANK2Q01484 3957 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 TMEM14DPA8MWL7 114 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 NDUFC1O43677 76 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 ZNF137PP52743 207 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 S100A10P60903 97 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms