RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
SGCE-209ENST00000462731 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
SGCE-209ENST00000462731 C1orf167Q5SNV9 1468 aa3.14□□□□□ -1.91
SGCE-209ENST00000462731 PDCD11Q14690 1871 aaKnown RBP3.13□□□□□ -1.91
SGCE-209ENST00000462731 ARFGEF2Q9Y6D5 1785 aa3.13□□□□□ -1.91
SGCE-209ENST00000462731 DOCK10Q96BY6 2186 aa3.13□□□□□ -1.91
SGCE-209ENST00000462731 SPINT3P49223 89 aa3.13□□□□□ -1.91
SGCE-209ENST00000462731 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
SGCE-209ENST00000462731 PROK2Q9HC23 129 aa3.13□□□□□ -1.91
SGCE-209ENST00000462731 TIAM1Q13009 1591 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 LAMA4Q16363 1823 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 ARFGEF1Q9Y6D6 1849 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 MGPP08493 103 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 ZNF137PP52743 207 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
SGCE-209ENST00000462731 RAPGEF6Q8TEU7 1601 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 GBF1Q92538 1859 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
SGCE-209ENST00000462731 CTXND1A0A1B0GTU2 59 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 M0R3E3 92 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 IFI27P40305 119 aaPredicted RBP3.11□□□□□ -1.91
SGCE-209ENST00000462731 GDF5OSQ5U4N7 250 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 CFAP43Q8NDM7 1665 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 PCDH15Q96QU1 1955 aa3.11□□□□□ -1.91
SGCE-209ENST00000462731 URB2Q14146 1524 aaKnown RBP3.1□□□□□ -1.91
SGCE-209ENST00000462731 SMIM5Q71RC9 77 aa3.1□□□□□ -1.91
SGCE-209ENST00000462731 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
SGCE-209ENST00000462731 TET1Q8NFU7 2136 aa3.09□□□□□ -1.91
SGCE-209ENST00000462731 Q96NJ1 140 aa3.09□□□□□ -1.91
SGCE-209ENST00000462731 PLAC8Q9NZF1 115 aa3.09□□□□□ -1.91
SGCE-209ENST00000462731 CACNA1AO00555 2505 aa3.09□□□□□ -1.92
SGCE-209ENST00000462731 ABCA9Q8IUA7 1624 aa3.08□□□□□ -1.92
SGCE-209ENST00000462731 ITSN1Q15811 1721 aa3.08□□□□□ -1.92
SGCE-209ENST00000462731 SCN7AQ01118 1682 aa3.08□□□□□ -1.92
SGCE-209ENST00000462731 A0A087WVE0 104 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 HCRTO43612 131 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 C3orf79P0CE67 100 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 CAV3P56539 151 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 COX17Q14061 63 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 SMIM4Q8WVI0 70 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 NKTRP30414 1462 aaKnown RBP3.07□□□□□ -1.92
SGCE-209ENST00000462731 CD163L1Q9NR16 1453 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 PREX1Q8TCU6 1659 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 LOC285556D6RIA3 1793 aa3.07□□□□□ -1.92
SGCE-209ENST00000462731 TRGV2A0A075B6R0 118 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 TRBV7-4A0A0J9YYF1 115 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 PLXNC1O60486 1568 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 FDCSPQ8NFU4 85 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 TNRC6BQ9UPQ9 1833 aaKnown RBP3.06□□□□□ -1.92
SGCE-209ENST00000462731 HILPDAQ9Y5L2 63 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 UTRNP46939 3433 aa3.06□□□□□ -1.92
SGCE-209ENST00000462731 MYO7BQ6PIF6 2116 aa3.05□□□□□ -1.92
SGCE-209ENST00000462731 SIPA1L3O60292 1781 aaPredicted RBP3.05□□□□□ -1.92
SGCE-209ENST00000462731 TRGV1A0A0A0MS02 117 aa3.05□□□□□ -1.92
SGCE-209ENST00000462731 IGKV4-1P06312 121 aa3.05□□□□□ -1.92
SGCE-209ENST00000462731 ATP7BP35670 1465 aa3.04□□□□□ -1.92
SGCE-209ENST00000462731 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
SGCE-209ENST00000462731 Q6ZQY7 126 aa3.04□□□□□ -1.92
SGCE-209ENST00000462731 ALKQ9UM73 1620 aa3.04□□□□□ -1.92
SGCE-209ENST00000462731 TRAV1-2A0A0B4J238 106 aa3.03□□□□□ -1.92
SGCE-209ENST00000462731 NHSL1Q5SYE7 1610 aa3.03□□□□□ -1.92
SGCE-209ENST00000462731 ADCY10Q96PN6 1610 aa3.02□□□□□ -1.93
SGCE-209ENST00000462731 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
SGCE-209ENST00000462731 CCL19Q99731 98 aa3.02□□□□□ -1.93
SGCE-209ENST00000462731 CEP170BQ9Y4F5 1589 aaPredicted RBP3.02□□□□□ -1.93
SGCE-209ENST00000462731 ZMYM4Q5VZL5 1548 aa3.02□□□□□ -1.93
SGCE-209ENST00000462731 COL5A1P20908 1838 aaPredicted RBP3.02□□□□□ -1.93
SGCE-209ENST00000462731 ICE1Q9Y2F5 2266 aa3.02□□□□□ -1.93
SGCE-209ENST00000462731 A0A1B0GUT8 65 aa3.01□□□□□ -1.93
SGCE-209ENST00000462731 H3BVH4 76 aa3.01□□□□□ -1.93
SGCE-209ENST00000462731 C10orf99Q6UWK7 81 aa3.01□□□□□ -1.93
SGCE-209ENST00000462731 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
SGCE-209ENST00000462731 TMEM263Q8WUH6 116 aaKnown RBP3.01□□□□□ -1.93
SGCE-209ENST00000462731 LINC00472Q9H8W2 130 aa3.01□□□□□ -1.93
SGCE-209ENST00000462731 PHRF1Q9P1Y6 1649 aaKnown RBP3.01□□□□□ -1.93
SGCE-209ENST00000462731 CDC42BPGQ6DT37 1551 aa3□□□□□ -1.93
SGCE-209ENST00000462731 H0Y9P7 68 aa3□□□□□ -1.93
SGCE-209ENST00000462731 DEFB107AQ8IZN7 70 aa3□□□□□ -1.93
SGCE-209ENST00000462731 ZCCHC13Q8WW36 166 aaKnown RBP3□□□□□ -1.93
SGCE-209ENST00000462731 EP400Q96L91 3159 aa3□□□□□ -1.93
SGCE-209ENST00000462731 FANCD2Q9BXW9 1451 aa3□□□□□ -1.93
SGCE-209ENST00000462731 KIF1AQ12756 1690 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 SHPRHQ149N8 1683 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 SDK1Q7Z5N4 2213 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 ACYP2P14621 99 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 GNG13Q9P2W3 67 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 ABCA6Q8N139 1617 aa2.99□□□□□ -1.93
SGCE-209ENST00000462731 RALGAPBQ86X10 1494 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 KIAA0556O60303 1618 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 FXYD6-FXYD2A0A087WZ82 144 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 ATXN8Q156A1 80 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 UNQ6190/PRO20217Q6UXQ8 127 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 GLI2P10070 1586 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 CRYBG1Q9Y4K1 1723 aa2.98□□□□□ -1.93
SGCE-209ENST00000462731 DNAJC13O75165 2243 aa2.97□□□□□ -1.93
SGCE-209ENST00000462731 UNC79Q9P2D8 2635 aa2.97□□□□□ -1.93
SGCE-209ENST00000462731 PDE4DIPQ5VU43 2346 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms