RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GCHFRP30047 84 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
COPS3-204ENST00000462236 ZNF56Q15929 161 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 TEX43Q6ZNM6 134 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 LINC00173Q6ZV60 143 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.68□□□□□ -1.98
COPS3-204ENST00000462236 NUP35Q8NFH5 326 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 OR10AG1Q8NH19 301 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 LINC00526Q96FQ7 95 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 SEC22CQ9BRL7 303 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 IGHV1-58A0A0C4DH39 117 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 A0A1W2PRE2 83 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 HMGB3O15347 200 aaKnown RBP2.67□□□□□ -1.98
COPS3-204ENST00000462236 PLA2G10O15496 165 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 TSPAN13O95857 204 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 OR5AL1P0C617 328 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 FGF6P10767 208 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 RPL12P30050 165 aaKnown RBP2.67□□□□□ -1.98
COPS3-204ENST00000462236 SYCNQ0VAF6 134 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 FAM162BQ5T6X4 162 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 WFDC1Q9HC57 220 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 ZFP30Q9Y2G7 519 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 HSPB11Q9Y547 144 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
COPS3-204ENST00000462236 A0A1W2PPV4 95 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 BCL2P10415 239 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 CDC34P49427 236 aaPredicted RBP2.66□□□□□ -1.98
COPS3-204ENST00000462236 SULT1A2P50226 295 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 UBE2D1P51668 147 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 CTAG1AP78358 180 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 TMEM167BQ9NRX6 74 aa2.66□□□□□ -1.98
COPS3-204ENST00000462236 TMSB15BA0A087X1C1 80 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 APOMO95445 188 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 LTAP01374 205 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 CRYGAP11844 174 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 MT1HP80294 61 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 OR5A1Q8NGJ0 315 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 HIST1H2BAQ96A08 127 aa2.65□□□□□ -1.99
COPS3-204ENST00000462236 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
COPS3-204ENST00000462236 IGKV3OR2-268A0A0C4DH90 116 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 LINC00959A0A1B0GUT2 108 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 LYRM1O43325 122 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 SIX6O95475 246 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 CXorf1O96002 111 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 ESDP10768 282 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 IL7P13232 177 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 KRTAP13-2Q52LG2 175 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 C5orf47Q569G3 176 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 TRIQKQ629K1 86 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 RASL11AQ6T310 242 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 TSKUQ8WUA8 353 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 FMC1Q96HJ9 113 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 RETNLBQ9BQ08 111 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 NIT2Q9NQR4 276 aa2.64□□□□□ -1.99
COPS3-204ENST00000462236 MUC21A0A140T8X8 626 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 A0A1B0GVX0 72 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 CENPXA8MT69 81 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 UBE2L6O14933 153 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 PPP1R2P9O14990 202 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 CCL25O15444 150 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 MPC2O95563 127 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 IGLC6P0CF74 106 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 NTF3P20783 257 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 ATP6V0CP27449 155 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 S100A5P33763 92 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 XCL1P47992 114 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 NKX2-5P52952 324 aaPredicted RBP2.63□□□□□ -1.99
COPS3-204ENST00000462236 H2BFSP57053 126 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 EIF5AP63241 154 aaKnown RBP2.63□□□□□ -1.99
COPS3-204ENST00000462236 COTL1Q14019 142 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 ZNF726P1Q15940 193 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 SCGB1C1Q8TD33 95 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 PPP1R1CQ8WVI7 109 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 ISOC2Q96AB3 205 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 AP1S3Q96PC3 154 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 PSMG3Q9BT73 122 aaPredicted RBP2.63□□□□□ -1.99
COPS3-204ENST00000462236 NKX6-2Q9C056 277 aaPredicted RBP2.63□□□□□ -1.99
COPS3-204ENST00000462236 USH2AO75445 5202 aa2.63□□□□□ -1.99
COPS3-204ENST00000462236 G3V3Q6 166 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 NCR2O95944 276 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 ZNF25P17030 456 aaPredicted RBP2.62□□□□□ -1.99
COPS3-204ENST00000462236 SERF2P84101 59 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 SPANXN1Q5VSR9 72 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 SMIM3Q9BZL3 60 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 MRPL35Q9NZE8 188 aaKnown RBP2.62□□□□□ -1.99
COPS3-204ENST00000462236 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
COPS3-204ENST00000462236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.61□□□□□ -1.99
COPS3-204ENST00000462236 IGKV2-29A2NJV5 120 aaPredicted RBP2.61□□□□□ -1.99
COPS3-204ENST00000462236 C19orf71A6NCJ1 209 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 MBP02144 154 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 SMIM17P0DL12 118 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 RPL18AQ02543 176 aaKnown RBP2.61□□□□□ -1.99
COPS3-204ENST00000462236 SS18Q15532 418 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 MRPL52Q86TS9 123 aaKnown RBP2.61□□□□□ -1.99
COPS3-204ENST00000462236 GATD1Q8NB37 220 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 CAMK2N2Q96S95 79 aa2.61□□□□□ -1.99
COPS3-204ENST00000462236 TCEAL7Q9BRU2 100 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms