RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
SF3A3-203ENST00000461869 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
SF3A3-203ENST00000461869 MRPL35Q9NZE8 188 aaKnown RBP10.49□□□□□ -0.73
SF3A3-203ENST00000461869 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
SF3A3-203ENST00000461869 PMCHL2Q9BQD1 86 aa10.48□□□□□ -0.73
SF3A3-203ENST00000461869 RBX1P62877 108 aa10.47□□□□□ -0.73
SF3A3-203ENST00000461869 SEC11AP67812 179 aa10.47□□□□□ -0.73
SF3A3-203ENST00000461869 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
SF3A3-203ENST00000461869 Q6ZRN7 208 aaPredicted RBP10.47□□□□□ -0.73
SF3A3-203ENST00000461869 FAM104AQ969W3 186 aa10.47□□□□□ -0.73
SF3A3-203ENST00000461869 TRAV9-2A0A087WT02 112 aa10.46□□□□□ -0.73
SF3A3-203ENST00000461869 EREGO14944 169 aa10.46□□□□□ -0.73
SF3A3-203ENST00000461869 XGP55808 180 aa10.46□□□□□ -0.73
SF3A3-203ENST00000461869 ATOH7Q8N100 152 aa10.46□□□□□ -0.73
SF3A3-203ENST00000461869 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
SF3A3-203ENST00000461869 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
SF3A3-203ENST00000461869 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
SF3A3-203ENST00000461869 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 SIVA1O15304 175 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 UBE2D1P51668 147 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 Q5VSD8 79 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
SF3A3-203ENST00000461869 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
SF3A3-203ENST00000461869 CCL25O15444 150 aa10.43□□□□□ -0.74
SF3A3-203ENST00000461869 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
SF3A3-203ENST00000461869 C11orf86A6NJI1 115 aa10.42□□□□□ -0.74
SF3A3-203ENST00000461869 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
SF3A3-203ENST00000461869 HERVK_113P61574 105 aa10.42□□□□□ -0.74
SF3A3-203ENST00000461869 HERVK_113P63121 156 aa10.42□□□□□ -0.74
SF3A3-203ENST00000461869 WFDC10BQ8IUB3 73 aa10.42□□□□□ -0.74
SF3A3-203ENST00000461869 GEMIN7Q9H840 131 aaKnown RBP10.42□□□□□ -0.74
SF3A3-203ENST00000461869 PAM16Q9Y3D7 125 aa10.42□□□□□ -0.74
SF3A3-203ENST00000461869 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
SF3A3-203ENST00000461869 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
SF3A3-203ENST00000461869 SPATA45Q537H7 98 aa10.41□□□□□ -0.74
SF3A3-203ENST00000461869 LINC01556Q5JQF7 62 aa10.41□□□□□ -0.74
SF3A3-203ENST00000461869 SS18Q15532 418 aa10.4□□□□□ -0.74
SF3A3-203ENST00000461869 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
SF3A3-203ENST00000461869 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 H3BRM9 83 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 CRPP02741 224 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 DNAH10OSP0CZ25 163 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
SF3A3-203ENST00000461869 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 A0A087WTM6 91 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 ZNF22P17026 224 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-203ENST00000461869 REG3AQ06141 175 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
SF3A3-203ENST00000461869 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 LINC00959A0A1B0GUT2 108 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-203ENST00000461869 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 MAJINQ3KP22 176 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 STPG4Q8N801 248 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
SF3A3-203ENST00000461869 K7EP13 123 aa10.36□□□□□ -0.75
SF3A3-203ENST00000461869 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
SF3A3-203ENST00000461869 E9PLD3 99 aa10.35□□□□□ -0.75
SF3A3-203ENST00000461869 CLPSL2Q6UWE3 100 aa10.35□□□□□ -0.75
SF3A3-203ENST00000461869 Q8N3U1 123 aa10.35□□□□□ -0.75
SF3A3-203ENST00000461869 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
SF3A3-203ENST00000461869 TMEM223A0PJW6 202 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 GCSHP23434 173 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 MIAQ16674 131 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 DMBT1Q9UGM3 2413 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-203ENST00000461869 FAT1Q14517 4588 aa10.34□□□□□ -0.75
SF3A3-203ENST00000461869 NMUP48645 174 aa10.33□□□□□ -0.76
SF3A3-203ENST00000461869 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SF3A3-203ENST00000461869 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
SF3A3-203ENST00000461869 HAMPP81172 84 aa10.32□□□□□ -0.76
SF3A3-203ENST00000461869 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
SF3A3-203ENST00000461869 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
SF3A3-203ENST00000461869 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 COX8AP10176 69 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 XCL1P47992 114 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 COX6A2Q02221 97 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 SLC25A34Q6PIV7 304 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 CD164L2Q6UWJ8 174 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 CHCHD10Q8WYQ3 142 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-203ENST00000461869 UQCR10Q9UDW1 63 aa10.31□□□□□ -0.76
SF3A3-203ENST00000461869 A0A087WZ39 114 aa10.3□□□□□ -0.76
SF3A3-203ENST00000461869 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
SF3A3-203ENST00000461869 LEPROTO15243 131 aa10.3□□□□□ -0.76
SF3A3-203ENST00000461869 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
SF3A3-203ENST00000461869 VPS13BQ7Z7G8 4022 aa10.29□□□□□ -0.76
SF3A3-203ENST00000461869 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
SF3A3-203ENST00000461869 J3QL48 77 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms