RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 ZNF815PA8K554 130 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 I3L3M4 83 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 PRM2P04554 102 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 FABP2P12104 132 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 UBE2D1P51668 147 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 EMP1P54849 157 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 RRN3P1Q2M238 152 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 FAM74A4Q5TZK3 123 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 HIST1H4GQ99525 98 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 SPANXB1Q9NS25 103 aaPredicted RBP2.68□□□□□ -1.98
CFHR3-204ENST00000461558 SPCS1Q9Y6A9 102 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 COL12A1Q99715 3063 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 APCP25054 2843 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 CSPG4Q6UVK1 2322 aa2.68□□□□□ -1.98
CFHR3-204ENST00000461558 CSMD2Q7Z408 3487 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 TRAV25A0A0B4J276 109 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 A8MWV9 139 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 G3V4G9 280 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 M0R2P5 195 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 LEPROTO15243 131 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 RS1O15537 224 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 IGHV3-53P01767 116 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 IGHV3-30P01768 117 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 GIG44P09565 113 aaPredicted RBP2.67□□□□□ -1.98
CFHR3-204ENST00000461558 IGHV3-30-5P0DP03 117 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 CD28P10747 220 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 ZNF22P17026 224 aaPredicted RBP2.67□□□□□ -1.98
CFHR3-204ENST00000461558 CRYBA4P53673 196 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 HERVK_113P61574 105 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 LINC01620Q4KN68 170 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 CFAP126Q5VTH2 177 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 SLC25A29Q8N8R3 303 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 CHCHD7Q9BUK0 85 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 ESM1Q9NQ30 184 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 Q9UF83 564 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 TENM4Q6N022 2769 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 CENPEQ02224 2701 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 ZNF462Q96JM2 2506 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 SPG11Q96JI7 2443 aa2.67□□□□□ -1.98
CFHR3-204ENST00000461558 MYO18BQ8IUG5 2567 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 IGHV3-73A0A0B4J1V6 119 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 A0A0J9YXV3 536 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 J3QQQ9 107 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 K7ERU9 68 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 TSPAN13O95857 204 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 INSP01308 110 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
CFHR3-204ENST00000461558 TMEM170BQ5T4T1 132 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 C1orf158Q8N1D5 194 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 TEX29Q8N6K0 151 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 WFDC11Q8NEX6 87 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 DYNLRB2Q8TF09 96 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 DNAJC30Q96LL9 226 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 C16orf95Q9H693 158 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 UBE2D4Q9Y2X8 147 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 ITPR3Q14573 2671 aa2.66□□□□□ -1.98
CFHR3-204ENST00000461558 USP9YO00507 2555 aaPredicted RBP2.65□□□□□ -1.98
CFHR3-204ENST00000461558 POLQO75417 2590 aa2.65□□□□□ -1.98
CFHR3-204ENST00000461558 ZNF469Q96JG9 3925 aaPredicted RBP2.65□□□□□ -1.98
CFHR3-204ENST00000461558 SORL1Q92673 2214 aa2.65□□□□□ -1.98
CFHR3-204ENST00000461558 ACACBO00763 2458 aa2.65□□□□□ -1.98
CFHR3-204ENST00000461558 TINCRA0A1B0GVN0 87 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 F8W1H4 67 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 H3BMG7 143 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 UBE2D3P61077 147 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 UBE2D2P62837 147 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 WFDC2Q14508 124 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 CEMP1Q6PRD7 247 aaPredicted RBP2.65□□□□□ -1.99
CFHR3-204ENST00000461558 SCGB1D4Q6XE38 83 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 NDUFA11Q86Y39 141 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 C10orf126Q8N4M7 172 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 LINC01587Q99440 93 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 TIMM21Q9BVV7 248 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 VCX2Q9H322 139 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 SPANXA1Q9NS26 97 aa2.65□□□□□ -1.99
CFHR3-204ENST00000461558 MRPL16Q9NX20 251 aaKnown RBP2.65□□□□□ -1.99
CFHR3-204ENST00000461558 NBPF19A0A087WUL8 3843 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 A0A0J9YXY3 114 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 PLAC8L1A1L4L8 177 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 IGKV2-29A2NJV5 120 aaPredicted RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 IGHV3-30-3P0DP02 117 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 HTN1P15515 57 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 Q6ZUT4 128 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 FAM19A3Q7Z5A8 133 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 SBSPONQ8IVN8 264 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 LINC01006Q8NI28 216 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 TMEM263Q8WUH6 116 aaKnown RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 VPS25Q9BRG1 176 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 SPANXCQ9NY87 97 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 XCL2Q9UBD3 114 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 TSSC4Q9Y5U2 329 aaPredicted RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 CHD6Q8TD26 2715 aa2.64□□□□□ -1.99
CFHR3-204ENST00000461558 KMT2BQ9UMN6 2715 aaPredicted RBP2.64□□□□□ -1.99
CFHR3-204ENST00000461558 SETXQ7Z333 2677 aaKnown RBP2.63□□□□□ -1.99
CFHR3-204ENST00000461558 LRRK2Q5S007 2527 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 ZFYVE26Q68DK2 2539 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 IGHV3-64A0A075B6Q5 118 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms