RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
SCFD1-203ENST00000458591 HERVK_113P63121 156 aa10.06□□□□□ -0.8
SCFD1-203ENST00000458591 K7EQD1 137 aa10.06□□□□□ -0.8
SCFD1-203ENST00000458591 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
SCFD1-203ENST00000458591 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
SCFD1-203ENST00000458591 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
SCFD1-203ENST00000458591 GIG44P09565 113 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-203ENST00000458591 WFDC11Q8NEX6 87 aa10.05□□□□□ -0.8
SCFD1-203ENST00000458591 CCDC179H3BU77 68 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 CCL24O00175 119 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
SCFD1-203ENST00000458591 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
SCFD1-203ENST00000458591 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 ACANP16112 2415 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
SCFD1-203ENST00000458591 F5H768 121 aa10.03□□□□□ -0.8
SCFD1-203ENST00000458591 COX7A2LO14548 114 aa10.03□□□□□ -0.8
SCFD1-203ENST00000458591 ACYP1P07311 99 aa10.03□□□□□ -0.8
SCFD1-203ENST00000458591 MTORP42345 2549 aa10.02□□□□□ -0.8
SCFD1-203ENST00000458591 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
SCFD1-203ENST00000458591 TRBV7-7A0A0K0K1E9 115 aa10.01□□□□□ -0.81
SCFD1-203ENST00000458591 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
SCFD1-203ENST00000458591 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
SCFD1-203ENST00000458591 TRGV2A0A075B6R0 118 aa10□□□□□ -0.81
SCFD1-203ENST00000458591 FAM19A3Q7Z5A8 133 aa10□□□□□ -0.81
SCFD1-203ENST00000458591 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
SCFD1-203ENST00000458591 DAZ2Q13117 558 aaKnown RBP9.99□□□□□ -0.81
SCFD1-203ENST00000458591 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
SCFD1-203ENST00000458591 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
SCFD1-203ENST00000458591 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
SCFD1-203ENST00000458591 UBE2L6O14933 153 aa9.99□□□□□ -0.81
SCFD1-203ENST00000458591 HERV-K104P63124 156 aa9.99□□□□□ -0.81
SCFD1-203ENST00000458591 SHISA2Q6UWI4 295 aa9.99□□□□□ -0.81
SCFD1-203ENST00000458591 ANK3Q12955 4377 aaKnown RBP9.98□□□□□ -0.81
SCFD1-203ENST00000458591 TRACP01848 142 aa9.98□□□□□ -0.81
SCFD1-203ENST00000458591 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
SCFD1-203ENST00000458591 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
SCFD1-203ENST00000458591 IMUPQ9GZP8 106 aa9.97□□□□□ -0.81
SCFD1-203ENST00000458591 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
SCFD1-203ENST00000458591 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
SCFD1-203ENST00000458591 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
SCFD1-203ENST00000458591 FN1P02751 2386 aaKnown RBP9.97□□□□□ -0.81
SCFD1-203ENST00000458591 TENM4Q6N022 2769 aa9.96□□□□□ -0.81
SCFD1-203ENST00000458591 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
SCFD1-203ENST00000458591 Q9HAA7 133 aa9.96□□□□□ -0.82
SCFD1-203ENST00000458591 MIR7-3HGQ8N6C7 128 aa9.95□□□□□ -0.82
SCFD1-203ENST00000458591 LINC01006Q8NI28 216 aa9.95□□□□□ -0.82
SCFD1-203ENST00000458591 CHCHD5Q9BSY4 110 aa9.95□□□□□ -0.82
SCFD1-203ENST00000458591 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
SCFD1-203ENST00000458591 C22orf24Q9Y442 160 aa9.95□□□□□ -0.82
SCFD1-203ENST00000458591 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
SCFD1-203ENST00000458591 LRRC75A-AS1Q8N1F1 130 aa9.94□□□□□ -0.82
SCFD1-203ENST00000458591 BAALC-AS2P0C853 105 aa9.94□□□□□ -0.82
SCFD1-203ENST00000458591 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
SCFD1-203ENST00000458591 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
SCFD1-203ENST00000458591 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
SCFD1-203ENST00000458591 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 CSNK1G2-AS1Q8NCQ2 148 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 PF4P02776 101 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
SCFD1-203ENST00000458591 GCN1Q92616 2671 aaKnown RBP9.92□□□□□ -0.82
SCFD1-203ENST00000458591 SMCR5Q8TEV8 140 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 CRPP02741 224 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 FHL2Q14192 279 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 TMEM86BQ8N661 226 aa9.92□□□□□ -0.82
SCFD1-203ENST00000458591 PFN2P35080 140 aa9.91□□□□□ -0.82
SCFD1-203ENST00000458591 LINC00158P58513 81 aa9.91□□□□□ -0.82
SCFD1-203ENST00000458591 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
SCFD1-203ENST00000458591 OVOL2Q9BRP0 275 aa9.91□□□□□ -0.82
SCFD1-203ENST00000458591 A0A096LPF7 62 aa9.9□□□□□ -0.82
SCFD1-203ENST00000458591 PDZD2O15018 2839 aa9.9□□□□□ -0.82
SCFD1-203ENST00000458591 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
SCFD1-203ENST00000458591 ITPR2Q14571 2701 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
SCFD1-203ENST00000458591 A0A087WYN8 130 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
SCFD1-203ENST00000458591 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 FAM110AQ9BQ89 295 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 ATP5G1P05496 136 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 CCL18P55774 89 aa9.88□□□□□ -0.83
SCFD1-203ENST00000458591 VWFP04275 2813 aa9.87□□□□□ -0.83
SCFD1-203ENST00000458591 MALP21145 153 aa9.87□□□□□ -0.83
SCFD1-203ENST00000458591 C3orf56Q8N813 242 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms