RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ACYP1P07311 99 aa9.87□□□□□ -0.83
TOP3B-213ENST00000457179 A0A0J9YX75 114 aa9.87□□□□□ -0.83
TOP3B-213ENST00000457179 ZNF625Q96I27 306 aaPredicted RBP9.87□□□□□ -0.83
TOP3B-213ENST00000457179 XCL2Q9UBD3 114 aa9.87□□□□□ -0.83
TOP3B-213ENST00000457179 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 K7EQG2 157 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 DSCR8Q96T75 97 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 NXPH4O95158 308 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
TOP3B-213ENST00000457179 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 A0A1B0GX51 115 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 TRACP01848 142 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 CCL24O00175 119 aa9.85□□□□□ -0.83
TOP3B-213ENST00000457179 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 IGHV3-16A0A0C4DH30 117 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 PROK1P58294 105 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 KRTAP1-1Q07627 177 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
TOP3B-213ENST00000457179 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 M0QY20 66 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 BAALC-AS2P0C853 105 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 HRCT1Q6UXD1 115 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 TIRAPP58753 221 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 RNF152Q8N8N0 203 aa9.83□□□□□ -0.84
TOP3B-213ENST00000457179 NBEAL1Q6ZS30 2694 aa9.82□□□□□ -0.84
TOP3B-213ENST00000457179 FBN1P35555 2871 aaKnown RBP9.82□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1A1P0DJD3 496 aaKnown RBP9.82□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1CP0DJD4 496 aa9.82□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1FQ15415 496 aaKnown RBP9.82□□□□□ -0.84
TOP3B-213ENST00000457179 Q9HAA7 133 aa9.82□□□□□ -0.84
TOP3B-213ENST00000457179 CRYGAP11844 174 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 ATP5G1P05496 136 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 Q8N2B8 174 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 C4orf3Q8WVX3 66 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 VSIG2Q96IQ7 327 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 Q9UF83 564 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 A0A087WVE0 104 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 ATOX1O00244 68 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 LY6G6DO95868 133 aa9.81□□□□□ -0.84
TOP3B-213ENST00000457179 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
TOP3B-213ENST00000457179 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
TOP3B-213ENST00000457179 C5orf38Q86SI9 138 aa9.8□□□□□ -0.84
TOP3B-213ENST00000457179 OXTP01178 125 aa9.8□□□□□ -0.84
TOP3B-213ENST00000457179 ANK3Q12955 4377 aaKnown RBP9.79□□□□□ -0.84
TOP3B-213ENST00000457179 F5H768 121 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 COX7A2LO14548 114 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 DEFB114Q30KQ6 69 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 TMEM89A2RUT3 159 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
TOP3B-213ENST00000457179 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
TOP3B-213ENST00000457179 MAP6D1Q9H9H5 199 aa9.78□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
TOP3B-213ENST00000457179 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
TOP3B-213ENST00000457179 IGHV3-53P01767 116 aa9.77□□□□□ -0.84
TOP3B-213ENST00000457179 CXCL5P42830 114 aa9.77□□□□□ -0.84
TOP3B-213ENST00000457179 STHQ8IWL8 128 aa9.77□□□□□ -0.84
TOP3B-213ENST00000457179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-213ENST00000457179 IGKV2-29A2NJV5 120 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-213ENST00000457179 RPS28P62857 69 aaKnown RBP9.77□□□□□ -0.85
TOP3B-213ENST00000457179 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.85
TOP3B-213ENST00000457179 IGHV3-38A0A0C4DH36 116 aa9.76□□□□□ -0.85
TOP3B-213ENST00000457179 DNAL4O96015 105 aa9.76□□□□□ -0.85
TOP3B-213ENST00000457179 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
TOP3B-213ENST00000457179 CIRBPQ14011 172 aaKnown RBP9.76□□□□□ -0.85
TOP3B-213ENST00000457179 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
TOP3B-213ENST00000457179 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
TOP3B-213ENST00000457179 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
TOP3B-213ENST00000457179 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 Q9H8V8 135 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 WIPF1O43516 503 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 PF4P02776 101 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 ODF3L2Q3SX64 289 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
TOP3B-213ENST00000457179 TMEM258P61165 79 aa9.74□□□□□ -0.85
TOP3B-213ENST00000457179 INAFM2P0DMQ5 153 aa9.74□□□□□ -0.85
TOP3B-213ENST00000457179 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
TOP3B-213ENST00000457179 Q6ZSN1 163 aa9.73□□□□□ -0.85
TOP3B-213ENST00000457179 HIST1H4AP62805 103 aaKnown RBP9.72□□□□□ -0.85
TOP3B-213ENST00000457179 SOSTDC1Q6X4U4 206 aa9.72□□□□□ -0.85
TOP3B-213ENST00000457179 SERP2Q8N6R1 65 aa9.72□□□□□ -0.85
TOP3B-213ENST00000457179 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
TOP3B-213ENST00000457179 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
TOP3B-213ENST00000457179 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.85
TOP3B-213ENST00000457179 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.85
TOP3B-213ENST00000457179 TMEM86BQ8N661 226 aa9.71□□□□□ -0.85
TOP3B-213ENST00000457179 MALP21145 153 aa9.71□□□□□ -0.85
TOP3B-213ENST00000457179 HILS1P60008 231 aa9.71□□□□□ -0.85
TOP3B-213ENST00000457179 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms