RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 AVPP01185 164 aa13.54□□□□□ -0.24
SEMA3B-208ENST00000456210 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
SEMA3B-208ENST00000456210 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
SEMA3B-208ENST00000456210 IGHV4-59P01825 116 aa13.53□□□□□ -0.24
SEMA3B-208ENST00000456210 COX7CP15954 63 aa13.53□□□□□ -0.24
SEMA3B-208ENST00000456210 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
SEMA3B-208ENST00000456210 OTOGQ6ZRI0 2925 aa13.53□□□□□ -0.24
SEMA3B-208ENST00000456210 LINC00694P0DN24 101 aa13.52□□□□□ -0.24
SEMA3B-208ENST00000456210 LINC01356Q8N9X3 169 aa13.52□□□□□ -0.24
SEMA3B-208ENST00000456210 MALP21145 153 aa13.52□□□□□ -0.25
SEMA3B-208ENST00000456210 UBE2E2Q96LR5 201 aa13.52□□□□□ -0.25
SEMA3B-208ENST00000456210 SORL1Q92673 2214 aa13.52□□□□□ -0.25
SEMA3B-208ENST00000456210 TRAV13-2A0A0B4J235 113 aa13.51□□□□□ -0.25
SEMA3B-208ENST00000456210 C2orf48Q96LS8 159 aa13.51□□□□□ -0.25
SEMA3B-208ENST00000456210 OVOL2Q9BRP0 275 aa13.51□□□□□ -0.25
SEMA3B-208ENST00000456210 GAGE2AQ6NT46 116 aa13.5□□□□□ -0.25
SEMA3B-208ENST00000456210 CYSRT1A8MQ03 144 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 CRYGAP11844 174 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 DEFB113Q30KQ7 82 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 A0A096LNT2 108 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 A0A1B0GX51 115 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 ATOX1O00244 68 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 DEFB112Q30KQ8 113 aa13.49□□□□□ -0.25
SEMA3B-208ENST00000456210 FLNAP21333 2647 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.259e-13■■■□□ 14.7
SEMA3B-208ENST00000456210 TRAV13-1A0A0B4J241 112 aa13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 J3QLI3 93 aa13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 INSP01308 110 aa13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 LRRC75A-AS1Q8N1F1 130 aa13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 CDC42SE2Q9NRR3 84 aa13.48□□□□□ -0.25
SEMA3B-208ENST00000456210 CRPP02741 224 aa13.47□□□□□ -0.25
SEMA3B-208ENST00000456210 ACANP16112 2415 aa13.47□□□□□ -0.25
SEMA3B-208ENST00000456210 Q9HAA7 133 aa13.46□□□□□ -0.25
SEMA3B-208ENST00000456210 TRBV10-1A0A0K0K1A3 114 aa13.46□□□□□ -0.26
SEMA3B-208ENST00000456210 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.26
SEMA3B-208ENST00000456210 MAPK1IP1LQ8NDC0 245 aa13.46□□□□□ -0.26
SEMA3B-208ENST00000456210 IL17DQ8TAD2 202 aa13.46□□□□□ -0.26
SEMA3B-208ENST00000456210 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.26
SEMA3B-208ENST00000456210 OBSCN-AS1Q96MR7 158 aa13.45□□□□□ -0.26
SEMA3B-208ENST00000456210 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 LINC00337Q8N6G1 96 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 J3KT08 172 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 SLURP1P55000 103 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 RPL36AP83881 106 aaKnown RBP13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 RPL36ALQ969Q0 106 aaKnown RBP13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 Q96MF0 132 aa13.44□□□□□ -0.26
SEMA3B-208ENST00000456210 DNAL4O96015 105 aa13.43□□□□□ -0.26
SEMA3B-208ENST00000456210 WFDC11Q8NEX6 87 aa13.43□□□□□ -0.26
SEMA3B-208ENST00000456210 TLN2Q9Y4G6 2542 aa13.43□□□□□ -0.26
SEMA3B-208ENST00000456210 K7EQD1 137 aa13.42□□□□□ -0.26
SEMA3B-208ENST00000456210 Q6JHZ5 121 aa13.42□□□□□ -0.26
SEMA3B-208ENST00000456210 ZNF702PQ9H963 129 aa13.42□□□□□ -0.26
SEMA3B-208ENST00000456210 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-208ENST00000456210 CSPG4Q6UVK1 2322 aa13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 RPL18AQ02543 176 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 CR1P17927 2039 aa13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 CREBBPQ92793 2442 aa13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 SND1-IT1Q9HBX3 110 aa13.41□□□□□ -0.26
SEMA3B-208ENST00000456210 A0A087WYN8 130 aa13.4□□□□□ -0.26
SEMA3B-208ENST00000456210 H0YGX0 51 aa13.4□□□□□ -0.26
SEMA3B-208ENST00000456210 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
SEMA3B-208ENST00000456210 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
SEMA3B-208ENST00000456210 COX7B2Q8TF08 81 aa13.39□□□□□ -0.27
SEMA3B-208ENST00000456210 LOC107984640A0A0U1RRK4 108 aa13.38□□□□□ -0.27
SEMA3B-208ENST00000456210 IGHV4-31P0DP07 118 aa13.38□□□□□ -0.27
SEMA3B-208ENST00000456210 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-208ENST00000456210 DEFB136Q30KP8 78 aa13.38□□□□□ -0.27
SEMA3B-208ENST00000456210 C14orf132Q9NPU4 83 aa13.38□□□□□ -0.27
SEMA3B-208ENST00000456210 TRGV1A0A0A0MS02 117 aa13.37□□□□□ -0.27
SEMA3B-208ENST00000456210 C18orf65Q6ZTR6 163 aa13.36□□□□□ -0.27
SEMA3B-208ENST00000456210 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
SEMA3B-208ENST00000456210 C1orf158Q8N1D5 194 aa13.35□□□□□ -0.27
SEMA3B-208ENST00000456210 LINC00846Q9NV44 126 aa13.35□□□□□ -0.27
SEMA3B-208ENST00000456210 HIVEP1P15822 2718 aa13.35□□□□□ -0.27
SEMA3B-208ENST00000456210 hADV29S1A0JD25 119 aa13.35□□□□□ -0.27
SEMA3B-208ENST00000456210 FSHBP01225 129 aa13.35□□□□□ -0.27
SEMA3B-208ENST00000456210 MAST4O15021 2626 aa13.34□□□□□ -0.27
SEMA3B-208ENST00000456210 UBE2L6O14933 153 aa13.34□□□□□ -0.27
SEMA3B-208ENST00000456210 SERP2Q8N6R1 65 aa13.34□□□□□ -0.27
SEMA3B-208ENST00000456210 XCL2Q9UBD3 114 aa13.34□□□□□ -0.27
SEMA3B-208ENST00000456210 CCL18P55774 89 aa13.33□□□□□ -0.27
SEMA3B-208ENST00000456210 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.27
SEMA3B-208ENST00000456210 DEFB114Q30KQ6 69 aa13.33□□□□□ -0.28
SEMA3B-208ENST00000456210 FAM19A5Q7Z5A7 132 aaPredicted RBP13.33□□□□□ -0.28
SEMA3B-208ENST00000456210 CUBNO60494 3623 aa13.33□□□□□ -0.28
SEMA3B-208ENST00000456210 IBA57-AS1B1ANH7 110 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 TMEM258P61165 79 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 SONP18583 2426 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 IGKV3D-7A0A0C4DH55 119 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 Q6YL49 198 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 Q6ZTI0 123 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 CYSTM1Q9H1C7 97 aa13.32□□□□□ -0.28
SEMA3B-208ENST00000456210 LINC00158P58513 81 aa13.31□□□□□ -0.28
SEMA3B-208ENST00000456210 C4orf3Q8WVX3 66 aa13.31□□□□□ -0.28
SEMA3B-208ENST00000456210 LECT2O14960 151 aa13.3□□□□□ -0.28
SEMA3B-208ENST00000456210 C5orf47Q569G3 176 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms