RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SMIM11BQ8TCY0 68 aa5.8□□□□□ -1.48
SMG1-202ENST00000446231 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
SMG1-202ENST00000446231 CCL18P55774 89 aa5.8□□□□□ -1.48
SMG1-202ENST00000446231 COL5A1P20908 1838 aaPredicted RBP5.8□□□□□ -1.48
SMG1-202ENST00000446231 Q8N814 137 aa5.8□□□□□ -1.48
SMG1-202ENST00000446231 APRG1Q8IVJ8 170 aa5.8□□□□□ -1.48
SMG1-202ENST00000446231 PTPRSQ13332 1948 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 FAM19A4Q96LR4 140 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 AMELXQ99217 191 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 A0A1W2PNU3 283 aaPredicted RBP5.79□□□□□ -1.48
SMG1-202ENST00000446231 IGFL2Q6UWQ7 119 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 DIRC1Q969H9 104 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 FAM19A3Q7Z5A8 133 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 PIP4P1Q86T03 277 aa5.79□□□□□ -1.48
SMG1-202ENST00000446231 LINC00242Q5T6M2 205 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 RPL28P46779 137 aaKnown RBP5.78□□□□□ -1.48
SMG1-202ENST00000446231 UTP20O75691 2785 aaKnown RBP5.78□□□□□ -1.48
SMG1-202ENST00000446231 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 SLURP1P55000 103 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 ZNF580Q9UK33 172 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 DEFB136Q30KP8 78 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
SMG1-202ENST00000446231 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 HILS1P60008 231 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 ETDCA0A1B0GVM5 59 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 TNFRSF13BO14836 293 aaPredicted RBP5.77□□□□□ -1.49
SMG1-202ENST00000446231 GRNP28799 593 aaKnown RBP5.77□□□□□ -1.49
SMG1-202ENST00000446231 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 IGHV4-38-2P0DP08 117 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 Q8N6K4 173 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
SMG1-202ENST00000446231 IGHV4-59P01825 116 aa5.76□□□□□ -1.49
SMG1-202ENST00000446231 MRGPRG-AS1Q2M3A8 158 aa5.76□□□□□ -1.49
SMG1-202ENST00000446231 FLNAP21333 2647 aaKnown RBP5.76□□□□□ -1.49
SMG1-202ENST00000446231 A6NED7 52 aa5.76□□□□□ -1.49
SMG1-202ENST00000446231 UBE2AP49459 152 aa5.76□□□□□ -1.49
SMG1-202ENST00000446231 A0A096LPF7 62 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 UBE2BP63146 152 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 C10orf142B7Z368 130 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 CFAP46Q8IYW2 2715 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 A6NDX4 124 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 Q6ZTI0 123 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 PRR4Q16378 134 aa5.75□□□□□ -1.49
SMG1-202ENST00000446231 COX6A2Q02221 97 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 HIGD2BQ4VC39 106 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 RETNQ9HD89 108 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 PRM2P04554 102 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 K7EQG2 157 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 NTM-AS1Q6ZSK4 140 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 PSPHP1O15172 72 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
SMG1-202ENST00000446231 LRCOL1A6NCL2 159 aa5.73□□□□□ -1.49
SMG1-202ENST00000446231 CHCHD10Q8WYQ3 142 aaPredicted RBP5.73□□□□□ -1.49
SMG1-202ENST00000446231 TMEM89A2RUT3 159 aa5.73□□□□□ -1.49
SMG1-202ENST00000446231 F8W735 103 aaPredicted RBP5.73□□□□□ -1.49
SMG1-202ENST00000446231 SMCR5Q8TEV8 140 aa5.73□□□□□ -1.49
SMG1-202ENST00000446231 PLA2G2CQ5R387 149 aa5.73□□□□□ -1.49
SMG1-202ENST00000446231 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
SMG1-202ENST00000446231 NDUFS5O43920 106 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 NSD1Q96L73 2696 aaPredicted RBP5.72□□□□□ -1.49
SMG1-202ENST00000446231 Q6ZSN1 163 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 IGLV5-39A0A0G2JS06 123 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 LINC01547P58512 204 aaPredicted RBP5.72□□□□□ -1.49
SMG1-202ENST00000446231 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 IGHV4-61A0A0C4DH41 118 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
SMG1-202ENST00000446231 PRR3P79522 188 aaKnown RBP5.72□□□□□ -1.49
SMG1-202ENST00000446231 CCL24O00175 119 aa5.71□□□□□ -1.49
SMG1-202ENST00000446231 UBR5O95071 2799 aaPredicted RBP5.71□□□□□ -1.49
SMG1-202ENST00000446231 CPAMD8Q8IZJ3 1885 aa5.71□□□□□ -1.49
SMG1-202ENST00000446231 RMI2Q96E14 147 aa5.71□□□□□ -1.5
SMG1-202ENST00000446231 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
SMG1-202ENST00000446231 SETXQ7Z333 2677 aaKnown RBP5.71□□□□□ -1.5
SMG1-202ENST00000446231 DEFB112Q30KQ8 113 aa5.71□□□□□ -1.5
SMG1-202ENST00000446231 ZNF843Q8N446 348 aa5.71□□□□□ -1.5
SMG1-202ENST00000446231 BCE1O60756 84 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 ESRGQ1W209 222 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 FAM30AQ9NZY2 134 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 NDUFB1O75438 58 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 LINC00315P59091 139 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 SMIM1B2RUZ4 78 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 LINC00269Q8N2A0 174 aa5.7□□□□□ -1.5
SMG1-202ENST00000446231 ZNF73O43830 326 aaPredicted RBP5.7□□□□□ -1.5
SMG1-202ENST00000446231 WIPF1O43516 503 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 A0A087WZ39 114 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 CD164L2Q6UWJ8 174 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 Q8N3U1 123 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 C1orf158Q8N1D5 194 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 Q6ZQY7 126 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 LMO4P61968 165 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 Q6ZVQ6 151 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms