RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 RPL39LQ96EH5 51 aaKnown RBP5.78□□□□□ -1.48
CCDC39-201ENST00000442201 OVOL2Q9BRP0 275 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 X6R8D5 127 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 H7C1H1 209 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 TRACP01848 142 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 Q8N8P6 123 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 M0QY20 66 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 UBE2WQ96B02 151 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 SMIM2Q9BVW6 85 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 UPK3BQ9BT76 320 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 TRGV2A0A075B6R0 118 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 TEX49A0A1B0GTD5 131 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
CCDC39-201ENST00000442201 IGLV2-18A0A075B6J9 118 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 J3QQQ9 107 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 PLNP26678 52 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 ACYP1P07311 99 aa5.76□□□□□ -1.49
CCDC39-201ENST00000442201 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 CFC1BP0CG36 223 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 CFC1P0CG37 223 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 MIFP14174 115 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 SDHAF1A6NFY7 115 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 C6orf226Q5I0X4 101 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 VCYO14598 125 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 PFN2P35080 140 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 POLR2KP53803 58 aaKnown RBP5.75□□□□□ -1.49
CCDC39-201ENST00000442201 LAGE3Q14657 143 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 Q6ZSN1 163 aa5.75□□□□□ -1.49
CCDC39-201ENST00000442201 MRPL35Q9NZE8 188 aaKnown RBP5.75□□□□□ -1.49
CCDC39-201ENST00000442201 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 IGHV4-28A0A0C4DH34 117 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 ATOX1O00244 68 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 TP53TG1Q9Y2A0 90 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 LYRM9A8MSI8 78 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 H3BT86 120 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 DEFB130BP0DP73 79 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 DEFB130AP0DP74 79 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 MGAM2Q2M2H8 2515 aa5.74□□□□□ -1.49
CCDC39-201ENST00000442201 TRBV27A0A0K0K1C4 114 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 hADV29S1A0JD25 119 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 Q8NAQ8 132 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 NOTCH1P46531 2555 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 TRAV13-1A0A0B4J241 112 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 NDUFC2-KCTD14E9PQ53 114 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 PRSS1P07477 247 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 FAM222AQ5U5X8 452 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 LINC00612Q8N6U2 182 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 DEFB4AO15263 64 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 PRB2P02812 416 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-201ENST00000442201 SRSF9Q13242 221 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC39-201ENST00000442201 KPRPQ5T749 579 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-201ENST00000442201 SFTA2Q6UW10 78 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
CCDC39-201ENST00000442201 TRGV4A0A0C4DH28 118 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 IGHV3-30P01768 117 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 IGHV3-30-5P0DP03 117 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 TRBV10-1A0A0K0K1A3 114 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 K7EQD1 137 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 C1orf195Q5TG92 126 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 NEXN-AS1Q8NBZ9 246 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 I3L3M4 83 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 IGHV3-33P01772 117 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 SLC25A29Q8N8R3 303 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 Q9UF83 564 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 PKIGQ9Y2B9 76 aa5.72□□□□□ -1.49
CCDC39-201ENST00000442201 ANK2Q01484 3957 aa5.71□□□□□ -1.49
CCDC39-201ENST00000442201 TRBV6-4A0A1B0GX49 114 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 F8VRH5 84 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 SPART-AS1P0CW21 52 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 RPL36AP83881 106 aaKnown RBP5.71□□□□□ -1.5
CCDC39-201ENST00000442201 RPL36ALQ969Q0 106 aaKnown RBP5.71□□□□□ -1.5
CCDC39-201ENST00000442201 RETNQ9HD89 108 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 NBEAL1Q6ZS30 2694 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 A0A0B4J2C4 111 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 K7EIL1 84 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 FHL2Q14192 279 aa5.71□□□□□ -1.5
CCDC39-201ENST00000442201 DAD1P61803 113 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 DEFB104AQ8WTQ1 72 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 A0A0J9YY99 117 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 EIF4EBP3O60516 100 aaPredicted RBP5.7□□□□□ -1.5
CCDC39-201ENST00000442201 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 RHOHQ15669 191 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms