RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 A0A1W2PPM0 123 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 FABP2P12104 132 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 HTN3P15516 51 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 RBX1P62877 108 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 COX6A2Q02221 97 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 RETNQ9HD89 108 aa9.15□□□□□ -0.94
CPSF4-206ENST00000441580 K7EP34 96 aa9.14□□□□□ -0.95
CPSF4-206ENST00000441580 HERV-K104P63124 156 aa9.14□□□□□ -0.95
CPSF4-206ENST00000441580 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
CPSF4-206ENST00000441580 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-206ENST00000441580 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 SS18Q15532 418 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 MIAQ16674 131 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 LELP1Q5T871 98 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 LYRM7Q5U5X0 104 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 LITAFQ99732 161 aa9.13□□□□□ -0.95
CPSF4-206ENST00000441580 A0A096LPF7 62 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 IFITM1P13164 125 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
CPSF4-206ENST00000441580 LINC01561Q8N1V8 128 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 SPATA25Q9BR10 227 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 SPCS1Q9Y6A9 102 aa9.12□□□□□ -0.95
CPSF4-206ENST00000441580 VWFP04275 2813 aa9.11□□□□□ -0.95
CPSF4-206ENST00000441580 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
CPSF4-206ENST00000441580 GAGE10A6NGK3 116 aa9.11□□□□□ -0.95
CPSF4-206ENST00000441580 IGLL5B9A064 214 aa9.11□□□□□ -0.95
CPSF4-206ENST00000441580 Q9H8V8 135 aa9.11□□□□□ -0.95
CPSF4-206ENST00000441580 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
CPSF4-206ENST00000441580 A0A087WZ39 114 aa9.1□□□□□ -0.95
CPSF4-206ENST00000441580 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
CPSF4-206ENST00000441580 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
CPSF4-206ENST00000441580 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
CPSF4-206ENST00000441580 ZNF625Q96I27 306 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-206ENST00000441580 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
CPSF4-206ENST00000441580 KPRPQ5T749 579 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-206ENST00000441580 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
CPSF4-206ENST00000441580 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
CPSF4-206ENST00000441580 A4D1N5 150 aa9.08□□□□□ -0.96
CPSF4-206ENST00000441580 APOMO95445 188 aa9.08□□□□□ -0.96
CPSF4-206ENST00000441580 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
CPSF4-206ENST00000441580 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
CPSF4-206ENST00000441580 Q6ZTC4 211 aa9.07□□□□□ -0.96
CPSF4-206ENST00000441580 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
CPSF4-206ENST00000441580 TSPAN13O95857 204 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 ANGP03950 147 aaKnown RBP9.06□□□□□ -0.96
CPSF4-206ENST00000441580 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 CFC1P0CG37 223 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 C11orf45Q8TAV5 145 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
CPSF4-206ENST00000441580 XCL1P47992 114 aa9.05□□□□□ -0.96
CPSF4-206ENST00000441580 REG3AQ06141 175 aa9.05□□□□□ -0.96
CPSF4-206ENST00000441580 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
CPSF4-206ENST00000441580 CXCL5P42830 114 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 Q8IZM0 81 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 TOMM7Q9P0U1 55 aa9.04□□□□□ -0.96
CPSF4-206ENST00000441580 K7EIL1 84 aa9.03□□□□□ -0.96
CPSF4-206ENST00000441580 COX7A2LO14548 114 aa9.03□□□□□ -0.96
CPSF4-206ENST00000441580 PRSS2P07478 247 aa9.03□□□□□ -0.96
CPSF4-206ENST00000441580 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
CPSF4-206ENST00000441580 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-206ENST00000441580 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
CPSF4-206ENST00000441580 CRPP02741 224 aa9.02□□□□□ -0.97
CPSF4-206ENST00000441580 C5orf38Q86SI9 138 aa9.02□□□□□ -0.97
CPSF4-206ENST00000441580 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
CPSF4-206ENST00000441580 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
CPSF4-206ENST00000441580 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
CPSF4-206ENST00000441580 IBA57-AS1B1ANH7 110 aa9.01□□□□□ -0.97
CPSF4-206ENST00000441580 IGHV3-33P01772 117 aa9.01□□□□□ -0.97
CPSF4-206ENST00000441580 NANOS2P60321 138 aaKnown RBP9.01□□□□□ -0.97
CPSF4-206ENST00000441580 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
CPSF4-206ENST00000441580 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
CPSF4-206ENST00000441580 DNAH3Q8TD57 4116 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 TRRAPQ9Y4A5 3859 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 TRBV20-1A0A075B6N2 111 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 Q1RN00 199 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 CFAP161Q6P656 301 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 MAST4O15021 2626 aa9□□□□□ -0.97
CPSF4-206ENST00000441580 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
CPSF4-206ENST00000441580 MALP21145 153 aa8.99□□□□□ -0.97
CPSF4-206ENST00000441580 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-206ENST00000441580 NPC2P61916 151 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 FOXI1Q12951 378 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 C6orf226Q5I0X4 101 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 Q8N3U1 123 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 DAND5Q8N907 189 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 STAB1Q9NY15 2570 aa8.98□□□□□ -0.97
CPSF4-206ENST00000441580 FBN1P35555 2871 aaKnown RBP8.98□□□□□ -0.97
CPSF4-206ENST00000441580 PSMB2P49721 201 aa8.97□□□□□ -0.97
CPSF4-206ENST00000441580 KLK12Q9UKR0 248 aa8.97□□□□□ -0.97
CPSF4-206ENST00000441580 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.97
CPSF4-206ENST00000441580 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms