RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
PCNX1-202ENST00000439984 COL5A1P20908 1838 aaPredicted RBP10.75□□□□□ -0.69
PCNX1-202ENST00000439984 EXPH5Q8NEV8 1989 aa10.75□□□□□ -0.69
PCNX1-202ENST00000439984 Q8NA96 180 aa10.75□□□□□ -0.69
PCNX1-202ENST00000439984 K7EQG2 157 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 REG3AQ06141 175 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 Q96MF0 132 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 LY6LH3BQJ8 138 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 FSTL3O95633 263 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 PRR15LQ9BU68 103 aa10.74□□□□□ -0.69
PCNX1-202ENST00000439984 COX6A2Q02221 97 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 Q8N3U1 123 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 PRYO14603 147 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 NTM-AS1Q6ZSK4 140 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 A0A096LNI7 61 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 ACACBO00763 2458 aa10.73□□□□□ -0.69
PCNX1-202ENST00000439984 CRYGAP11844 174 aa10.72□□□□□ -0.69
PCNX1-202ENST00000439984 PSMG3-AS1Q96PY0 264 aa10.72□□□□□ -0.69
PCNX1-202ENST00000439984 IGF2RP11717 2491 aa10.71□□□□□ -0.69
PCNX1-202ENST00000439984 RPL28P46779 137 aaKnown RBP10.71□□□□□ -0.69
PCNX1-202ENST00000439984 UBE2AP49459 152 aa10.71□□□□□ -0.7
PCNX1-202ENST00000439984 C9orf85Q96MD7 179 aa10.71□□□□□ -0.7
PCNX1-202ENST00000439984 PRR3P79522 188 aaKnown RBP10.7□□□□□ -0.7
PCNX1-202ENST00000439984 LOC100131303A0A0U1RQF7 123 aa10.7□□□□□ -0.7
PCNX1-202ENST00000439984 TLN1Q9Y490 2541 aaKnown RBP10.7□□□□□ -0.7
PCNX1-202ENST00000439984 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
PCNX1-202ENST00000439984 KLLNB2CW77 178 aa10.7□□□□□ -0.7
PCNX1-202ENST00000439984 PRORYQ9H606 182 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 CHD9Q3L8U1 2897 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 Q8N814 137 aa10.69□□□□□ -0.7
PCNX1-202ENST00000439984 A6NDX4 124 aa10.68□□□□□ -0.7
PCNX1-202ENST00000439984 DEFB135Q30KP9 77 aa10.68□□□□□ -0.7
PCNX1-202ENST00000439984 SMIM1B2RUZ4 78 aa10.68□□□□□ -0.7
PCNX1-202ENST00000439984 HIGD2AQ9BW72 106 aa10.68□□□□□ -0.7
PCNX1-202ENST00000439984 CACNA1AO00555 2505 aa10.67□□□□□ -0.7
PCNX1-202ENST00000439984 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
PCNX1-202ENST00000439984 FHL3Q13643 280 aa10.67□□□□□ -0.7
PCNX1-202ENST00000439984 C10orf99Q6UWK7 81 aa10.67□□□□□ -0.7
PCNX1-202ENST00000439984 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
PCNX1-202ENST00000439984 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
PCNX1-202ENST00000439984 PRRC2CQ9Y520 2896 aaKnown RBP10.67□□□□□ -0.7
PCNX1-202ENST00000439984 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
PCNX1-202ENST00000439984 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
PCNX1-202ENST00000439984 ATRXP46100 2492 aa10.66□□□□□ -0.7
PCNX1-202ENST00000439984 PRRC2AP48634 2157 aaKnown RBP10.66□□□□□ -0.7
PCNX1-202ENST00000439984 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
PCNX1-202ENST00000439984 CSPG4Q6UVK1 2322 aa10.64□□□□□ -0.71
PCNX1-202ENST00000439984 EDN2P20800 178 aa10.64□□□□□ -0.71
PCNX1-202ENST00000439984 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
PCNX1-202ENST00000439984 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
PCNX1-202ENST00000439984 TET2Q6N021 2002 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-202ENST00000439984 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
PCNX1-202ENST00000439984 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
PCNX1-202ENST00000439984 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
PCNX1-202ENST00000439984 A0A0C4DFX4 3053 aa10.63□□□□□ -0.71
PCNX1-202ENST00000439984 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
PCNX1-202ENST00000439984 C9orf116Q5BN46 136 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-202ENST00000439984 NCOR2Q9Y618 2525 aa10.62□□□□□ -0.71
PCNX1-202ENST00000439984 COL4A2P08572 1712 aa10.62□□□□□ -0.71
PCNX1-202ENST00000439984 A0A087WZ39 114 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 AMELXQ99217 191 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-202ENST00000439984 ESRGQ1W209 222 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 LINC00208Q96KT6 92 aa10.61□□□□□ -0.71
PCNX1-202ENST00000439984 BEAN1Q3B7T3 259 aa10.6□□□□□ -0.71
PCNX1-202ENST00000439984 Q6ZVQ6 151 aa10.6□□□□□ -0.71
PCNX1-202ENST00000439984 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
PCNX1-202ENST00000439984 CEP295Q9C0D2 2601 aa10.6□□□□□ -0.71
PCNX1-202ENST00000439984 LINC01547P58512 204 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-202ENST00000439984 ZNF73O43830 326 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-202ENST00000439984 Q8N2B8 174 aa10.59□□□□□ -0.71
PCNX1-202ENST00000439984 FAM19A4Q96LR4 140 aa10.59□□□□□ -0.71
PCNX1-202ENST00000439984 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
PCNX1-202ENST00000439984 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-202ENST00000439984 Q8N9L7 120 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 DSCAMO60469 2012 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 TMEM89A2RUT3 159 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 IGHV4-30-4P0DP06 118 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 IGHV4-31P0DP07 118 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 LMO4P61968 165 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 Q8N6K4 173 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 LINC01546A6NGU7 62 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
PCNX1-202ENST00000439984 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
PCNX1-202ENST00000439984 A8MTW9 85 aa10.57□□□□□ -0.72
PCNX1-202ENST00000439984 DEFB114Q30KQ6 69 aa10.57□□□□□ -0.72
PCNX1-202ENST00000439984 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.57□□□□□ -0.72
PCNX1-202ENST00000439984 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
PCNX1-202ENST00000439984 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
PCNX1-202ENST00000439984 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
PCNX1-202ENST00000439984 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
PCNX1-202ENST00000439984 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
PCNX1-202ENST00000439984 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms