RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 C15orf53Q8NAA6 179 aa9.89□□□□□ -0.83
PTCHD3-201ENST00000438700 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
PTCHD3-201ENST00000438700 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
PTCHD3-201ENST00000438700 TRAV8-4A0A0B4J246 113 aa9.88□□□□□ -0.83
PTCHD3-201ENST00000438700 DGAT2L7PQ6IED9 249 aa9.88□□□□□ -0.83
PTCHD3-201ENST00000438700 DAND5Q8N907 189 aa9.88□□□□□ -0.83
PTCHD3-201ENST00000438700 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 H7C423 109 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 K7EQD1 137 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 LINC00694P0DN24 101 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 TINCRA0A1B0GVN0 87 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
PTCHD3-201ENST00000438700 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE7O76087 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 GAGE4Q13068 117 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 IFITM1P13164 125 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 UBE2WQ96B02 151 aa9.86□□□□□ -0.83
PTCHD3-201ENST00000438700 TRGV2A0A075B6R0 118 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 M0QXV9 152 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 VSIG2Q96IQ7 327 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 CDKN2A-AS1Q9UH64 79 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 ICOSQ9Y6W8 199 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 PLAC8L1A1L4L8 177 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 NTM-AS1Q6ZSK4 140 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 NBEAL2Q6ZNJ1 2754 aa9.85□□□□□ -0.83
PTCHD3-201ENST00000438700 FBN1P35555 2871 aaKnown RBP9.84□□□□□ -0.83
PTCHD3-201ENST00000438700 C3orf56Q8N813 242 aa9.84□□□□□ -0.83
PTCHD3-201ENST00000438700 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PTCHD3-201ENST00000438700 STAB1Q9NY15 2570 aa9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 LOC100131303A0A0U1RQF7 123 aa9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 COX6A2Q02221 97 aa9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
PTCHD3-201ENST00000438700 TRAV13-1A0A0B4J241 112 aa9.82□□□□□ -0.84
PTCHD3-201ENST00000438700 TRBV10-1A0A0K0K1A3 114 aa9.82□□□□□ -0.84
PTCHD3-201ENST00000438700 DAZ4Q86SG3 579 aaKnown RBP9.82□□□□□ -0.84
PTCHD3-201ENST00000438700 DAZ3Q9NR90 486 aaKnown RBP9.82□□□□□ -0.84
PTCHD3-201ENST00000438700 A0A0U1RRA0 63 aa9.81□□□□□ -0.84
PTCHD3-201ENST00000438700 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
PTCHD3-201ENST00000438700 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
PTCHD3-201ENST00000438700 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
PTCHD3-201ENST00000438700 WIPF1O43516 503 aa9.8□□□□□ -0.84
PTCHD3-201ENST00000438700 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
PTCHD3-201ENST00000438700 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
PTCHD3-201ENST00000438700 MIAQ16674 131 aa9.79□□□□□ -0.84
PTCHD3-201ENST00000438700 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
PTCHD3-201ENST00000438700 IGLV5-45A0A087WSX0 123 aa9.78□□□□□ -0.84
PTCHD3-201ENST00000438700 TIRAPP58753 221 aa9.78□□□□□ -0.84
PTCHD3-201ENST00000438700 UBE2L6O14933 153 aa9.78□□□□□ -0.84
PTCHD3-201ENST00000438700 Q6Q795 121 aa9.78□□□□□ -0.84
PTCHD3-201ENST00000438700 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
PTCHD3-201ENST00000438700 LST1O00453 97 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 HERVK_113P63121 156 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 SHISA2Q6UWI4 295 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 COX6CP09669 75 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 OVOL2Q9BRP0 275 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 TMEM243Q9BU79 118 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
PTCHD3-201ENST00000438700 DEFB130BP0DP73 79 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 DEFB130AP0DP74 79 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 HERV-K104P63124 156 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 Q9H8V8 135 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 CSDC2Q9Y534 153 aaKnown RBP9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 X6R8D5 127 aa9.76□□□□□ -0.85
PTCHD3-201ENST00000438700 TRBV6-4A0A1B0GX49 114 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 H3BT86 120 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 DEFB135Q30KP9 77 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 SMIM1B2RUZ4 78 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 APOC4P55056 127 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 KIR2DL5BQ8NHK3 375 aa9.75□□□□□ -0.85
PTCHD3-201ENST00000438700 COL6A5A8TX70 2615 aa9.74□□□□□ -0.85
PTCHD3-201ENST00000438700 NDUFA1O15239 70 aa9.74□□□□□ -0.85
PTCHD3-201ENST00000438700 FHL2Q14192 279 aa9.74□□□□□ -0.85
PTCHD3-201ENST00000438700 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
PTCHD3-201ENST00000438700 IGHV4-30-4P0DP06 118 aa9.73□□□□□ -0.85
PTCHD3-201ENST00000438700 PKD1L1Q8TDX9 2849 aa9.73□□□□□ -0.85
PTCHD3-201ENST00000438700 SMCR5Q8TEV8 140 aa9.72□□□□□ -0.85
PTCHD3-201ENST00000438700 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
PTCHD3-201ENST00000438700 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
PTCHD3-201ENST00000438700 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
PTCHD3-201ENST00000438700 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.86
PTCHD3-201ENST00000438700 F5H768 121 aa9.71□□□□□ -0.86
PTCHD3-201ENST00000438700 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms