RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SIVA1O15304 175 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 ANGP03950 147 aaKnown RBP4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 UBE2D1P51668 147 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 PYY3Q5JQD4 70 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 LGALS9CQ6DKI2 356 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 ENHOQ6UWT2 76 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 Q9H8V8 135 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 MRPL35Q9NZE8 188 aaKnown RBP4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 KLK12Q9UKR0 248 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 CHTOPQ9Y3Y2 248 aaKnown RBP4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 COX11Q9Y6N1 276 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 PRKDCP78527 4128 aaKnown RBP4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 STAB2Q8WWQ8 2551 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 TRAV13-1A0A0B4J241 112 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 IGKV3OR2-268A0A0C4DH90 116 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 LINC00959A0A1B0GUT2 108 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 F8VRH5 84 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 REG3AQ06141 175 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 LINC00242Q5T6M2 205 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
LSM3P3-201ENST00000436601 C20orf202A1L168 122 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 A4D1N5 150 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 KRTAP10-2P60368 255 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 COX6A2Q02221 97 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 NFE4Q86UQ8 179 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 ATOH7Q8N100 152 aa4.72□□□□□ -1.65
LSM3P3-201ENST00000436601 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 IBA57-AS1B1ANH7 110 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 DPM2O94777 84 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 IGKCP01834 107 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 PLNP26678 52 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 MAJINQ3KP22 176 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 UBE2WQ96B02 151 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
LSM3P3-201ENST00000436601 IGLV10-54A0A075B6I4 117 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 TRAV9-2A0A087WT02 112 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 IGHV3OR16-9A0A0B4J2B5 98 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 hDV102S1A0JD36 115 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 CCL25O15444 150 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 SMIM6P0DI80 62 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 ZNF22P17026 224 aaPredicted RBP4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 XCL1P47992 114 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 SS18Q15532 418 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 KRTAP26-1Q6PEX3 210 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 STPG4Q8N801 248 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 CHCHD10Q8WYQ3 142 aaPredicted RBP4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 CDKN2A-AS1Q9UH64 79 aa4.7□□□□□ -1.66
LSM3P3-201ENST00000436601 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 NBDYA0A0U1RRE5 68 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 K7EP13 123 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 CRPP02741 224 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 HERVK_113P63121 156 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 SEC11AP67812 179 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 MIAQ16674 131 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 TMEM170BQ5T4T1 132 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 C10orf126Q8N4M7 172 aa4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 GEMIN7Q9H840 131 aaKnown RBP4.69□□□□□ -1.66
LSM3P3-201ENST00000436601 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 LY6G6CO95867 125 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 C5orf38Q86SI9 138 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 LINC00518Q8N0U6 118 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 LINC00469Q8N7U9 141 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 Q9HAA7 133 aa4.68□□□□□ -1.66
LSM3P3-201ENST00000436601 A0A087WZ39 114 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 IGKV2D-26A0A0A0MRZ7 120 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 SPINK8P0C7L1 97 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 Q6ZR54 194 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 C12orf57Q99622 126 aa4.67□□□□□ -1.66
LSM3P3-201ENST00000436601 IGHV3-64A0A075B6Q5 118 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 IGKV2D-24A0A075B6R9 120 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 SMIM1B2RUZ4 78 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 E9PLD3 99 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 H3BRM9 83 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 M0R2N4 97 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 COX7A2LO14548 114 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 TTC32Q5I0X7 151 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 Q75L30 129 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
LSM3P3-201ENST00000436601 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 HSBP1L1C9JCN9 74 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 SPATA45Q537H7 98 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 RMI2Q96E14 147 aa4.65□□□□□ -1.67
LSM3P3-201ENST00000436601 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms