RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 TNP2Q05952 138 aa7.5□□□□□ -1.21
HMGCL-204ENST00000436439 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
HMGCL-204ENST00000436439 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
HMGCL-204ENST00000436439 COX11Q9Y6N1 276 aa7.5□□□□□ -1.21
HMGCL-204ENST00000436439 A6NDN8 102 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 TAL2Q16559 108 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
HMGCL-204ENST00000436439 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 SPANXA1Q9NS26 97 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 CSDC2Q9Y534 153 aaKnown RBP7.49□□□□□ -1.21
HMGCL-204ENST00000436439 HSPG2P98160 4391 aa7.49□□□□□ -1.21
HMGCL-204ENST00000436439 IGLV4-3A0A075B6K6 122 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 TRAV8-6A0A0B4J262 113 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 TMEM243Q9BU79 118 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 UBE2D4Q9Y2X8 147 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
HMGCL-204ENST00000436439 NBDYA0A0U1RRE5 68 aa7.47□□□□□ -1.21
HMGCL-204ENST00000436439 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
HMGCL-204ENST00000436439 VCX2Q9H322 139 aa7.47□□□□□ -1.21
HMGCL-204ENST00000436439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.21
HMGCL-204ENST00000436439 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.21
HMGCL-204ENST00000436439 TAX1BP3O14907 124 aa7.46□□□□□ -1.21
HMGCL-204ENST00000436439 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.21
HMGCL-204ENST00000436439 LELP1Q5T871 98 aa7.46□□□□□ -1.21
HMGCL-204ENST00000436439 MAPKAPK5-AS1Q8N8E1 139 aa7.46□□□□□ -1.21
HMGCL-204ENST00000436439 AMELXQ99217 191 aa7.46□□□□□ -1.21
HMGCL-204ENST00000436439 TTTY13Q9BZ97 58 aa7.46□□□□□ -1.21
HMGCL-204ENST00000436439 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.22
HMGCL-204ENST00000436439 UBE2L6O14933 153 aa7.46□□□□□ -1.22
HMGCL-204ENST00000436439 LYPD5Q6UWN5 251 aa7.46□□□□□ -1.22
HMGCL-204ENST00000436439 C6orf223Q8N319 242 aa7.46□□□□□ -1.22
HMGCL-204ENST00000436439 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
HMGCL-204ENST00000436439 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 H3BRM9 83 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 CCL18P55774 89 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 TMEM170BQ5T4T1 132 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 OPRPNQ99935 248 aaPredicted RBP7.45□□□□□ -1.22
HMGCL-204ENST00000436439 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
HMGCL-204ENST00000436439 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
HMGCL-204ENST00000436439 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
HMGCL-204ENST00000436439 CEND1Q8N111 149 aa7.44□□□□□ -1.22
HMGCL-204ENST00000436439 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
HMGCL-204ENST00000436439 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
HMGCL-204ENST00000436439 LEPROTO15243 131 aa7.43□□□□□ -1.22
HMGCL-204ENST00000436439 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
HMGCL-204ENST00000436439 GCSHP23434 173 aa7.43□□□□□ -1.22
HMGCL-204ENST00000436439 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
HMGCL-204ENST00000436439 Q9H8V8 135 aa7.43□□□□□ -1.22
HMGCL-204ENST00000436439 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
HMGCL-204ENST00000436439 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 TINCRA0A1B0GVN0 87 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 ESRGQ1W209 222 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 OR5A1Q8NGJ0 315 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 TMEM101Q96IK0 257 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
HMGCL-204ENST00000436439 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 J3QQQ9 107 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 CDK2AP2O75956 126 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
HMGCL-204ENST00000436439 PTTG1IPP53801 180 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 GAGE6Q13070 117 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 UBE2V1Q13404 147 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 VAMP3Q15836 100 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 Q6ZUT4 128 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 Q6ZVH6 145 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
HMGCL-204ENST00000436439 DNAH5Q8TE73 4624 aa7.4□□□□□ -1.22
HMGCL-204ENST00000436439 IGLV4-60A0A075B6I1 120 aa7.4□□□□□ -1.22
HMGCL-204ENST00000436439 FXYD2P54710 66 aa7.4□□□□□ -1.22
HMGCL-204ENST00000436439 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
HMGCL-204ENST00000436439 FAM19A3Q7Z5A8 133 aa7.4□□□□□ -1.22
HMGCL-204ENST00000436439 UBE2D1P51668 147 aa7.39□□□□□ -1.23
HMGCL-204ENST00000436439 RBX1P62877 108 aa7.39□□□□□ -1.23
HMGCL-204ENST00000436439 UPK3BQ9BT76 320 aa7.39□□□□□ -1.23
HMGCL-204ENST00000436439 SPANXB1Q9NS25 103 aaPredicted RBP7.39□□□□□ -1.23
HMGCL-204ENST00000436439 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
HMGCL-204ENST00000436439 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
HMGCL-204ENST00000436439 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
HMGCL-204ENST00000436439 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
HMGCL-204ENST00000436439 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
HMGCL-204ENST00000436439 A0A1B0GWB2 263 aa7.37□□□□□ -1.23
HMGCL-204ENST00000436439 A6NJY4 79 aa7.37□□□□□ -1.23
HMGCL-204ENST00000436439 CCL25O15444 150 aa7.37□□□□□ -1.23
HMGCL-204ENST00000436439 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
HMGCL-204ENST00000436439 NHP2Q9NX24 153 aaKnown RBP7.37□□□□□ -1.23
HMGCL-204ENST00000436439 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
HMGCL-204ENST00000436439 DNAH10OSP0CZ25 163 aa7.36□□□□□ -1.23
HMGCL-204ENST00000436439 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGCL-204ENST00000436439 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
HMGCL-204ENST00000436439 TTC32Q5I0X7 151 aa7.36□□□□□ -1.23
HMGCL-204ENST00000436439 LINC01556Q5JQF7 62 aa7.36□□□□□ -1.23
HMGCL-204ENST00000436439 WFDC10BQ8IUB3 73 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms