RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 G0S2P27469 103 aa11.7□□□□□ -0.54
UBXN1-203ENST00000436354 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
UBXN1-203ENST00000436354 C2orf66Q6UXQ4 117 aa11.7□□□□□ -0.54
UBXN1-203ENST00000436354 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
UBXN1-203ENST00000436354 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
UBXN1-203ENST00000436354 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
UBXN1-203ENST00000436354 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 KRTAP26-1Q6PEX3 210 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 CYSLTR1Q9Y271 337 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
UBXN1-203ENST00000436354 A0A096LNJ9 63 aa11.68□□□□□ -0.54
UBXN1-203ENST00000436354 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
UBXN1-203ENST00000436354 LINC00310P59036 64 aa11.68□□□□□ -0.54
UBXN1-203ENST00000436354 CNBPP62633 177 aaKnown RBP11.68□□□□□ -0.54
UBXN1-203ENST00000436354 RNASEKQ6P5S7 137 aaKnown RBP11.68□□□□□ -0.54
UBXN1-203ENST00000436354 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
UBXN1-203ENST00000436354 FAM104AQ969W3 186 aa11.68□□□□□ -0.54
UBXN1-203ENST00000436354 C1orf196B1AJZ1 125 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 NPSP0C0P6 89 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 OR5A1Q8NGJ0 315 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
UBXN1-203ENST00000436354 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
UBXN1-203ENST00000436354 IGIPA6NJ69 53 aa11.65□□□□□ -0.54
UBXN1-203ENST00000436354 SERF1AO75920 110 aa11.65□□□□□ -0.54
UBXN1-203ENST00000436354 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
UBXN1-203ENST00000436354 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 A0A087WYN8 130 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-203ENST00000436354 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 HBDP02042 147 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
UBXN1-203ENST00000436354 Q6ZUT4 128 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
UBXN1-203ENST00000436354 REG3AQ06141 175 aa11.63□□□□□ -0.55
UBXN1-203ENST00000436354 IGLV10-54A0A075B6I4 117 aa11.62□□□□□ -0.55
UBXN1-203ENST00000436354 IGLV4-3A0A075B6K6 122 aa11.62□□□□□ -0.55
UBXN1-203ENST00000436354 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
UBXN1-203ENST00000436354 ERASQ7Z444 233 aa11.62□□□□□ -0.55
UBXN1-203ENST00000436354 TRAV8-4A0A0B4J246 113 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 NUPR1O60356 82 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 HSBP1O75506 76 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 PMCHL1Q16048 86 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 SPACA4Q8TDM5 124 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 C7orf33Q8WU49 177 aa11.61□□□□□ -0.55
UBXN1-203ENST00000436354 TMEM141Q96I45 108 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 AMELXQ99217 191 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
UBXN1-203ENST00000436354 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 LRP2P98164 4655 aa11.6□□□□□ -0.55
UBXN1-203ENST00000436354 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
UBXN1-203ENST00000436354 SLPIP03973 132 aa11.58□□□□□ -0.56
UBXN1-203ENST00000436354 RNASE13Q5GAN3 156 aaKnown RBP11.58□□□□□ -0.56
UBXN1-203ENST00000436354 PAPPA-AS1Q5QFB9 102 aa11.58□□□□□ -0.56
UBXN1-203ENST00000436354 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
UBXN1-203ENST00000436354 CCL25O15444 150 aa11.57□□□□□ -0.56
UBXN1-203ENST00000436354 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
UBXN1-203ENST00000436354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
UBXN1-203ENST00000436354 ATP5LO75964 103 aa11.56□□□□□ -0.56
UBXN1-203ENST00000436354 Q6ZN92 141 aa11.56□□□□□ -0.56
UBXN1-203ENST00000436354 TEX43Q6ZNM6 134 aa11.56□□□□□ -0.56
UBXN1-203ENST00000436354 NDUFA6P56556 154 aa11.55□□□□□ -0.56
UBXN1-203ENST00000436354 TNXBP22105 4242 aa11.55□□□□□ -0.56
UBXN1-203ENST00000436354 RNF213Q63HN8 5207 aa11.55□□□□□ -0.56
UBXN1-203ENST00000436354 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
UBXN1-203ENST00000436354 IFITM10A6NMD0 228 aa11.54□□□□□ -0.56
UBXN1-203ENST00000436354 C2orf88Q9BSF0 95 aa11.54□□□□□ -0.56
UBXN1-203ENST00000436354 VCX2Q9H322 139 aa11.54□□□□□ -0.56
UBXN1-203ENST00000436354 UBE2D1P51668 147 aa11.53□□□□□ -0.56
UBXN1-203ENST00000436354 SS18Q15532 418 aa11.53□□□□□ -0.56
UBXN1-203ENST00000436354 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
UBXN1-203ENST00000436354 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
UBXN1-203ENST00000436354 PACRGQ96M98 296 aaPredicted RBP11.53□□□□□ -0.56
UBXN1-203ENST00000436354 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
UBXN1-203ENST00000436354 LEPROTL1O95214 131 aa11.52□□□□□ -0.57
UBXN1-203ENST00000436354 PRR3P79522 188 aaKnown RBP11.52□□□□□ -0.57
UBXN1-203ENST00000436354 COX6A2Q02221 97 aa11.52□□□□□ -0.57
UBXN1-203ENST00000436354 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
UBXN1-203ENST00000436354 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
UBXN1-203ENST00000436354 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
UBXN1-203ENST00000436354 ODF1Q14990 250 aa11.51□□□□□ -0.57
UBXN1-203ENST00000436354 PMVKQ15126 192 aa11.51□□□□□ -0.57
UBXN1-203ENST00000436354 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
UBXN1-203ENST00000436354 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
UBXN1-203ENST00000436354 FOXI1Q12951 378 aa11.5□□□□□ -0.57
UBXN1-203ENST00000436354 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
UBXN1-203ENST00000436354 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
UBXN1-203ENST00000436354 HSPB8Q9UJY1 196 aa11.5□□□□□ -0.57
UBXN1-203ENST00000436354 KRTAP10-8P60410 259 aa11.49□□□□□ -0.57
UBXN1-203ENST00000436354 LINC00242Q5T6M2 205 aa11.49□□□□□ -0.57
UBXN1-203ENST00000436354 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
UBXN1-203ENST00000436354 TRAV12-1A0A0B4J245 112 aa11.48□□□□□ -0.57
UBXN1-203ENST00000436354 IGKV2-24A0A0C4DH68 120 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms