RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
LIMK1-203ENST00000435201 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
LIMK1-203ENST00000435201 F5H768 121 aa11.75□□□□□ -0.53
LIMK1-203ENST00000435201 GAGE6Q13070 117 aa11.75□□□□□ -0.53
LIMK1-203ENST00000435201 TEX48A0A1B0GUV7 120 aa11.74□□□□□ -0.53
LIMK1-203ENST00000435201 CHCHD5Q9BSY4 110 aa11.74□□□□□ -0.53
LIMK1-203ENST00000435201 Q9H8V8 135 aa11.74□□□□□ -0.53
LIMK1-203ENST00000435201 SCGB1C2P0DMR2 95 aa11.74□□□□□ -0.53
LIMK1-203ENST00000435201 TCL1BO95988 128 aa11.73□□□□□ -0.53
LIMK1-203ENST00000435201 GYPEP15421 78 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 Q1RN00 199 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
LIMK1-203ENST00000435201 J3QR89 54 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 HERV-K104P63124 156 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 DEFB135Q30KP9 77 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 ETDBQ3ZM63 59 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 MTURNQ8N3F0 131 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 WFDC9Q8NEX5 89 aa11.71□□□□□ -0.53
LIMK1-203ENST00000435201 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-203ENST00000435201 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
LIMK1-203ENST00000435201 H7C2G1 150 aa11.7□□□□□ -0.54
LIMK1-203ENST00000435201 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
LIMK1-203ENST00000435201 HIVEP1P15822 2718 aa11.7□□□□□ -0.54
LIMK1-203ENST00000435201 TRBV30A0A0K0K1B3 111 aa11.69□□□□□ -0.54
LIMK1-203ENST00000435201 WIPF1O43516 503 aa11.69□□□□□ -0.54
LIMK1-203ENST00000435201 NPC2P61916 151 aa11.69□□□□□ -0.54
LIMK1-203ENST00000435201 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
LIMK1-203ENST00000435201 VWFP04275 2813 aa11.68□□□□□ -0.54
LIMK1-203ENST00000435201 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-203ENST00000435201 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
LIMK1-203ENST00000435201 MIFP14174 115 aa11.67□□□□□ -0.54
LIMK1-203ENST00000435201 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
LIMK1-203ENST00000435201 DAND5Q8N907 189 aa11.67□□□□□ -0.54
LIMK1-203ENST00000435201 LINC00308Q8TCZ7 52 aa11.67□□□□□ -0.54
LIMK1-203ENST00000435201 PAX4O43316 350 aa11.66□□□□□ -0.54
LIMK1-203ENST00000435201 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
LIMK1-203ENST00000435201 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
LIMK1-203ENST00000435201 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
LIMK1-203ENST00000435201 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
LIMK1-203ENST00000435201 TENM1Q9UKZ4 2725 aa11.65□□□□□ -0.54
LIMK1-203ENST00000435201 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
LIMK1-203ENST00000435201 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.54
LIMK1-203ENST00000435201 DAD1P61803 113 aa11.64□□□□□ -0.55
LIMK1-203ENST00000435201 ATXN8Q156A1 80 aa11.64□□□□□ -0.55
LIMK1-203ENST00000435201 TRIAP1O43715 76 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 Q8NAQ8 132 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 A0A087WZ39 114 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 M0QXV9 152 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 COX6CP09669 75 aa11.63□□□□□ -0.55
LIMK1-203ENST00000435201 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
LIMK1-203ENST00000435201 DEFB4AO15263 64 aa11.62□□□□□ -0.55
LIMK1-203ENST00000435201 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
LIMK1-203ENST00000435201 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 ATP5G1P05496 136 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 IGHV4-30-4P0DP06 118 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 PCP4P48539 62 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 TEN1Q86WV5 123 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 FOXI1Q12951 378 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 SS18Q15532 418 aa11.61□□□□□ -0.55
LIMK1-203ENST00000435201 TRAV26-1A0A087WT03 109 aa11.6□□□□□ -0.55
LIMK1-203ENST00000435201 SLC25A20O43772 301 aa11.6□□□□□ -0.55
LIMK1-203ENST00000435201 SPART-AS1P0CW21 52 aa11.6□□□□□ -0.55
LIMK1-203ENST00000435201 TOMM7Q9P0U1 55 aa11.6□□□□□ -0.55
LIMK1-203ENST00000435201 ATRQ13535 2644 aa11.6□□□□□ -0.55
LIMK1-203ENST00000435201 C9JAW5 83 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 A0A096LPF7 62 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 PPDPFLQ8WWR9 84 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 CELA1Q9UNI1 258 aa11.59□□□□□ -0.55
LIMK1-203ENST00000435201 C5orf38Q86SI9 138 aa11.57□□□□□ -0.56
LIMK1-203ENST00000435201 LINC01561Q8N1V8 128 aa11.57□□□□□ -0.56
LIMK1-203ENST00000435201 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
LIMK1-203ENST00000435201 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
LIMK1-203ENST00000435201 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
LIMK1-203ENST00000435201 ANKRD29Q8N6D5 301 aa11.55□□□□□ -0.56
LIMK1-203ENST00000435201 XCL1P47992 114 aa11.55□□□□□ -0.56
LIMK1-203ENST00000435201 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
LIMK1-203ENST00000435201 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
LIMK1-203ENST00000435201 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
LIMK1-203ENST00000435201 GAGE12HA6NDE8 117 aa11.54□□□□□ -0.56
LIMK1-203ENST00000435201 MIR7-3HGQ8N6C7 128 aa11.54□□□□□ -0.56
LIMK1-203ENST00000435201 LST1O00453 97 aa11.53□□□□□ -0.56
LIMK1-203ENST00000435201 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
LIMK1-203ENST00000435201 Q8IZM0 81 aa11.53□□□□□ -0.56
LIMK1-203ENST00000435201 LINC00158P58513 81 aa11.52□□□□□ -0.57
LIMK1-203ENST00000435201 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
LIMK1-203ENST00000435201 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
LIMK1-203ENST00000435201 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
LIMK1-203ENST00000435201 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
LIMK1-203ENST00000435201 TRAV13-2A0A0B4J235 113 aa11.51□□□□□ -0.57
LIMK1-203ENST00000435201 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
LIMK1-203ENST00000435201 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
LIMK1-203ENST00000435201 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
LIMK1-203ENST00000435201 H3BT86 120 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms