RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 UBE2D2P62837 147 aa8.68□□□□□ -1.02
CLDN4-203ENST00000435050 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
CLDN4-203ENST00000435050 TINCRA0A1B0GVN0 87 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 A8MTW9 85 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 WFDC2Q14508 124 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
CLDN4-203ENST00000435050 COX6A2Q02221 97 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CLDN4-203ENST00000435050 TRBV6-4A0A1B0GX49 114 aa8.66□□□□□ -1.02
CLDN4-203ENST00000435050 MRAPQ8TCY5 172 aa8.66□□□□□ -1.02
CLDN4-203ENST00000435050 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
CLDN4-203ENST00000435050 G3V4G9 280 aa8.66□□□□□ -1.02
CLDN4-203ENST00000435050 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
CLDN4-203ENST00000435050 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
CLDN4-203ENST00000435050 SS18Q15532 418 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 STAB1Q9NY15 2570 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 ATP5G1P05496 136 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 RNF183Q96D59 192 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 TRBV6-8A0A0A6YYG3 113 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 C9JAW5 83 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 UBE2D1P51668 147 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.02
CLDN4-203ENST00000435050 NSD1Q96L73 2696 aaPredicted RBP8.65□□□□□ -1.03
CLDN4-203ENST00000435050 M0QXV9 152 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 TSPAN13O95857 204 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 PRB2P02812 416 aaPredicted RBP8.65□□□□□ -1.03
CLDN4-203ENST00000435050 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 FHL2Q14192 279 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 AMELXQ99217 191 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.03
CLDN4-203ENST00000435050 IGHV4-30-4P0DP06 118 aa8.64□□□□□ -1.03
CLDN4-203ENST00000435050 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
CLDN4-203ENST00000435050 CFC1P0CG37 223 aa8.64□□□□□ -1.03
CLDN4-203ENST00000435050 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
CLDN4-203ENST00000435050 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 RETNQ9HD89 108 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
CLDN4-203ENST00000435050 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 COL6A5A8TX70 2615 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 PDZD2O15018 2839 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 C5orf47Q569G3 176 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 PTH2Q96A98 100 aa8.62□□□□□ -1.03
CLDN4-203ENST00000435050 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
CLDN4-203ENST00000435050 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 IGHV3-33P01772 117 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
CLDN4-203ENST00000435050 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
CLDN4-203ENST00000435050 CRPP02741 224 aa8.6□□□□□ -1.03
CLDN4-203ENST00000435050 ADAMTSL4-AS1Q5T5F5 129 aa8.6□□□□□ -1.03
CLDN4-203ENST00000435050 SMIM9A6NGZ8 99 aa8.6□□□□□ -1.03
CLDN4-203ENST00000435050 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
CLDN4-203ENST00000435050 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 TIRAPP58753 221 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
CLDN4-203ENST00000435050 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
CLDN4-203ENST00000435050 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
CLDN4-203ENST00000435050 PLAC8L1A1L4L8 177 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 F8W1H4 67 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 X6R8D5 127 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 OTOGQ6ZRI0 2925 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 TCL1BO95988 128 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 MIAQ16674 131 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
CLDN4-203ENST00000435050 EDA2RQ9HAV5 297 aa8.57□□□□□ -1.04
CLDN4-203ENST00000435050 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
CLDN4-203ENST00000435050 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
CLDN4-203ENST00000435050 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
CLDN4-203ENST00000435050 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
CLDN4-203ENST00000435050 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
CLDN4-203ENST00000435050 LINC00526Q96FQ7 95 aa8.56□□□□□ -1.04
CLDN4-203ENST00000435050 MIFP14174 115 aa8.55□□□□□ -1.04
CLDN4-203ENST00000435050 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
CLDN4-203ENST00000435050 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
CLDN4-203ENST00000435050 NDUFA1O15239 70 aa8.55□□□□□ -1.04
CLDN4-203ENST00000435050 SLC25A20O43772 301 aa8.55□□□□□ -1.04
CLDN4-203ENST00000435050 Q8N3U1 123 aa8.54□□□□□ -1.04
CLDN4-203ENST00000435050 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
CLDN4-203ENST00000435050 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
CLDN4-203ENST00000435050 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
CLDN4-203ENST00000435050 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
CLDN4-203ENST00000435050 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
CLDN4-203ENST00000435050 COX7A2LO14548 114 aa8.53□□□□□ -1.04
CLDN4-203ENST00000435050 DNAL4O96015 105 aa8.53□□□□□ -1.04
CLDN4-203ENST00000435050 REG3AQ06141 175 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms