RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 APCSP02743 223 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 Q0VG73 95 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 CYSLTR1Q9Y271 337 aa10.06□□□□□ -0.8
HLA-DQB1-205ENST00000434651 VCYO14598 125 aa10.05□□□□□ -0.8
HLA-DQB1-205ENST00000434651 WFDC2Q14508 124 aa10.05□□□□□ -0.8
HLA-DQB1-205ENST00000434651 BVES-AS1Q5T3Y7 98 aa10.04□□□□□ -0.8
HLA-DQB1-205ENST00000434651 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
HLA-DQB1-205ENST00000434651 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
HLA-DQB1-205ENST00000434651 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
HLA-DQB1-205ENST00000434651 LECT2O14960 151 aa10.04□□□□□ -0.8
HLA-DQB1-205ENST00000434651 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 UBE2L6O14933 153 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 FGF6P10767 208 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
HLA-DQB1-205ENST00000434651 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 H3BRM9 83 aa10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 FCER1GP30273 86 aa10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 LAGE3Q14657 143 aa10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 RNASEKQ6P5S7 137 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-205ENST00000434651 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 PPP1R17O96001 155 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
HLA-DQB1-205ENST00000434651 A0A1B0GUV1 79 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 REG3AQ06141 175 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 NFE4Q86UQ8 179 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 KIR2DL4Q99706 377 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 ANAPC13Q9BS18 74 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 A0A087WTM6 91 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 PSCAO43653 123 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 HLA-DQA1P01909 254 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 IFI27P40305 119 aaPredicted RBP10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 Q6ZVH6 145 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 BAALCQ8WXS3 180 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 FAM104AQ969W3 186 aa10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
HLA-DQB1-205ENST00000434651 SPATA12Q7Z6I5 190 aa9.98□□□□□ -0.81
HLA-DQB1-205ENST00000434651 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
HLA-DQB1-205ENST00000434651 CRPP02741 224 aa9.97□□□□□ -0.81
HLA-DQB1-205ENST00000434651 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
HLA-DQB1-205ENST00000434651 TRAPPC1Q9Y5R8 145 aa9.97□□□□□ -0.81
HLA-DQB1-205ENST00000434651 B5MCH6 92 aa9.96□□□□□ -0.81
HLA-DQB1-205ENST00000434651 F8W1H4 67 aa9.96□□□□□ -0.81
HLA-DQB1-205ENST00000434651 Q8N8P6 123 aa9.96□□□□□ -0.81
HLA-DQB1-205ENST00000434651 APOBP04114 4563 aaKnown RBP9.96□□□□□ -0.81
HLA-DQB1-205ENST00000434651 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
HLA-DQB1-205ENST00000434651 H7C423 109 aa9.95□□□□□ -0.82
HLA-DQB1-205ENST00000434651 Q6ZUT4 128 aa9.95□□□□□ -0.82
HLA-DQB1-205ENST00000434651 C1orf43Q9BWL3 253 aa9.95□□□□□ -0.82
HLA-DQB1-205ENST00000434651 MT-ND6P03923 174 aa9.94□□□□□ -0.82
HLA-DQB1-205ENST00000434651 MIAQ16674 131 aa9.94□□□□□ -0.82
HLA-DQB1-205ENST00000434651 ERASQ7Z444 233 aa9.94□□□□□ -0.82
HLA-DQB1-205ENST00000434651 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 TM2D2Q9BX73 214 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 A0A1B0GX51 115 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 SLC25A34Q6PIV7 304 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 OR13C6PQ8NH95 151 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
HLA-DQB1-205ENST00000434651 RYR1P21817 5038 aa9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 KRTDAPP60985 99 aa9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 MAP1LC3CQ9BXW4 147 aa9.92□□□□□ -0.82
HLA-DQB1-205ENST00000434651 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 SERF1AO75920 110 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 RPS28P62857 69 aaKnown RBP9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 LINC01620Q4KN68 170 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 Q8N814 137 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 PRSS3P2Q8NHM4 247 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 DNAH8Q96JB1 4490 aa9.91□□□□□ -0.82
HLA-DQB1-205ENST00000434651 LINC00310P59036 64 aa9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 Q6Q795 121 aa9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 CHCHD10Q8WYQ3 142 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 RMI2Q96E14 147 aa9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 HSPG2P98160 4391 aa9.9□□□□□ -0.82
HLA-DQB1-205ENST00000434651 NUPR1O60356 82 aa9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 FABP2P12104 132 aa9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 XCL1P47992 114 aa9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 NXT2Q9NPJ8 142 aaKnown RBP9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 A0A1W2PPM0 123 aa9.89□□□□□ -0.83
HLA-DQB1-205ENST00000434651 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms