RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 IGHV3-33P01772 117 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 PSMB2P49721 201 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 ETDBQ3ZM63 59 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 F5H768 121 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 K7ERU9 68 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 TCL1BO95988 128 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
RFTN1-203ENST00000432519 HERVK_113P63121 156 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 SVIPQ8NHG7 77 aa10.27□□□□□ -0.77
RFTN1-203ENST00000432519 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 INSL3P51460 131 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 FAM19A3Q7Z5A8 133 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 Q9H8V8 135 aa10.26□□□□□ -0.77
RFTN1-203ENST00000432519 F8W1H4 67 aa10.25□□□□□ -0.77
RFTN1-203ENST00000432519 G3V4G9 280 aa10.25□□□□□ -0.77
RFTN1-203ENST00000432519 GYPEP15421 78 aa10.24□□□□□ -0.77
RFTN1-203ENST00000432519 MIAQ16674 131 aa10.24□□□□□ -0.77
RFTN1-203ENST00000432519 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
RFTN1-203ENST00000432519 NDUFA1O15239 70 aa10.24□□□□□ -0.77
RFTN1-203ENST00000432519 SPANXDQ9BXN6 97 aa10.23□□□□□ -0.77
RFTN1-203ENST00000432519 SPANXCQ9NY87 97 aa10.23□□□□□ -0.77
RFTN1-203ENST00000432519 A0A0B4J2C4 111 aa10.23□□□□□ -0.77
RFTN1-203ENST00000432519 CMYA5Q8N3K9 4069 aa10.23□□□□□ -0.77
RFTN1-203ENST00000432519 CIDEAO60543 219 aa10.22□□□□□ -0.77
RFTN1-203ENST00000432519 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
RFTN1-203ENST00000432519 ERG28Q9UKR5 140 aa10.21□□□□□ -0.78
RFTN1-203ENST00000432519 MAST4O15021 2626 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 SOSTDC1Q6X4U4 206 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 Q8N3U1 123 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 ATP6V0E2Q8NHE4 81 aa10.2□□□□□ -0.78
RFTN1-203ENST00000432519 PRIMA1Q86XR5 153 aa10.19□□□□□ -0.78
RFTN1-203ENST00000432519 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
RFTN1-203ENST00000432519 Q1RN00 199 aa10.19□□□□□ -0.78
RFTN1-203ENST00000432519 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
RFTN1-203ENST00000432519 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 TRIAP1O43715 76 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 PRO0255Q9UI72 69 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 H7C423 109 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
RFTN1-203ENST00000432519 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 IGHV4-30-4P0DP06 118 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 OXLD1Q5BKU9 147 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 Q8NAQ8 132 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 TIMM17BO60830 172 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
RFTN1-203ENST00000432519 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
RFTN1-203ENST00000432519 TMEM262E9PQX1 116 aa10.16□□□□□ -0.78
RFTN1-203ENST00000432519 PAX4O43316 350 aa10.16□□□□□ -0.78
RFTN1-203ENST00000432519 APOC4P55056 127 aa10.15□□□□□ -0.78
RFTN1-203ENST00000432519 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
RFTN1-203ENST00000432519 MEIG1Q5JSS6 88 aa10.15□□□□□ -0.78
RFTN1-203ENST00000432519 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
RFTN1-203ENST00000432519 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
RFTN1-203ENST00000432519 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
RFTN1-203ENST00000432519 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 HTN3P15516 51 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 RPL13AP40429 203 aaKnown RBP10.13□□□□□ -0.79
RFTN1-203ENST00000432519 XCL1P47992 114 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 DAD1P61803 113 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
RFTN1-203ENST00000432519 LYRM7Q5U5X0 104 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 ICOSQ9Y6W8 199 aa10.13□□□□□ -0.79
RFTN1-203ENST00000432519 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 C9JAW5 83 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 IFITM1P13164 125 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 CLEC2BQ92478 149 aa10.12□□□□□ -0.79
RFTN1-203ENST00000432519 KRTAP24-1Q3LI83 254 aa10.11□□□□□ -0.79
RFTN1-203ENST00000432519 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
RFTN1-203ENST00000432519 RETNQ9HD89 108 aa10.11□□□□□ -0.79
RFTN1-203ENST00000432519 A0A087WZ39 114 aa10.1□□□□□ -0.79
RFTN1-203ENST00000432519 WIPF1O43516 503 aa10.1□□□□□ -0.79
RFTN1-203ENST00000432519 FOXI1Q12951 378 aa10.1□□□□□ -0.79
RFTN1-203ENST00000432519 RNF183Q96D59 192 aa10.1□□□□□ -0.79
RFTN1-203ENST00000432519 SLC25A20O43772 301 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 IGLV10-54A0A075B6I4 117 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 MIFP14174 115 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
RFTN1-203ENST00000432519 HERV-K104P63124 156 aa10.08□□□□□ -0.8
RFTN1-203ENST00000432519 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
RFTN1-203ENST00000432519 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
RFTN1-203ENST00000432519 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
RFTN1-203ENST00000432519 ATP5G1P05496 136 aa10.07□□□□□ -0.8
RFTN1-203ENST00000432519 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
RFTN1-203ENST00000432519 PFN2P35080 140 aa10.06□□□□□ -0.8
RFTN1-203ENST00000432519 SPART-AS1P0CW21 52 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms