RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
RTN1-204ENST00000432103 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
RTN1-204ENST00000432103 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
RTN1-204ENST00000432103 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
RTN1-204ENST00000432103 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
RTN1-204ENST00000432103 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
RTN1-204ENST00000432103 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
RTN1-204ENST00000432103 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
RTN1-204ENST00000432103 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
RTN1-204ENST00000432103 TRBV20-1A0A075B6N2 111 aa9.58□□□□□ -0.88
RTN1-204ENST00000432103 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
RTN1-204ENST00000432103 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
RTN1-204ENST00000432103 A0A096LPF7 62 aa9.57□□□□□ -0.88
RTN1-204ENST00000432103 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
RTN1-204ENST00000432103 TIRAPP58753 221 aa9.57□□□□□ -0.88
RTN1-204ENST00000432103 PPDPFLQ8WWR9 84 aa9.57□□□□□ -0.88
RTN1-204ENST00000432103 CDIP1Q9H305 208 aa9.57□□□□□ -0.88
RTN1-204ENST00000432103 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
RTN1-204ENST00000432103 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
RTN1-204ENST00000432103 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 ZNF815PA8K554 130 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 M0QXV9 152 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 TSPAN13O95857 204 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 HERVK_113P61574 105 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 PMVKQ15126 192 aa9.56□□□□□ -0.88
RTN1-204ENST00000432103 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
RTN1-204ENST00000432103 TEN1Q86WV5 123 aa9.55□□□□□ -0.88
RTN1-204ENST00000432103 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
RTN1-204ENST00000432103 LELP1Q5T871 98 aa9.55□□□□□ -0.88
RTN1-204ENST00000432103 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
RTN1-204ENST00000432103 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
RTN1-204ENST00000432103 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
RTN1-204ENST00000432103 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
RTN1-204ENST00000432103 PSMB2P49721 201 aa9.53□□□□□ -0.88
RTN1-204ENST00000432103 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
RTN1-204ENST00000432103 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
RTN1-204ENST00000432103 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
RTN1-204ENST00000432103 Q6ZUT4 128 aa9.52□□□□□ -0.89
RTN1-204ENST00000432103 A0A1B0GUV1 79 aa9.52□□□□□ -0.89
RTN1-204ENST00000432103 PLEKHB2Q96CS7 222 aa9.52□□□□□ -0.89
RTN1-204ENST00000432103 LOC107984156A0A0G2JMH3 177 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 GAGE6Q13070 117 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 ARL17AQ8IVW1 177 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 AMELXQ99217 191 aa9.51□□□□□ -0.89
RTN1-204ENST00000432103 IGLV4-69A0A075B6H9 119 aa9.5□□□□□ -0.89
RTN1-204ENST00000432103 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
RTN1-204ENST00000432103 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
RTN1-204ENST00000432103 CEMP1Q6PRD7 247 aaPredicted RBP9.5□□□□□ -0.89
RTN1-204ENST00000432103 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
RTN1-204ENST00000432103 LINC01600Q96MT4 127 aa9.5□□□□□ -0.89
RTN1-204ENST00000432103 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
RTN1-204ENST00000432103 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
RTN1-204ENST00000432103 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
RTN1-204ENST00000432103 PRO1854Q9UHT4 67 aa9.49□□□□□ -0.89
RTN1-204ENST00000432103 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
RTN1-204ENST00000432103 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 TCL1BO95988 128 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 CFC1P0CG37 223 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 XGP55808 180 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
RTN1-204ENST00000432103 CCL18P55774 89 aa9.47□□□□□ -0.89
RTN1-204ENST00000432103 ESRGQ1W209 222 aa9.46□□□□□ -0.9
RTN1-204ENST00000432103 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
RTN1-204ENST00000432103 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 TINCRA0A1B0GVN0 87 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 J3QQQ9 107 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 LEPROTO15243 131 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
RTN1-204ENST00000432103 ANKRD29Q8N6D5 301 aa9.44□□□□□ -0.9
RTN1-204ENST00000432103 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
RTN1-204ENST00000432103 HERVK_113P63121 156 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
RTN1-204ENST00000432103 TSPEAR-AS2P59090 65 aa9.43□□□□□ -0.9
RTN1-204ENST00000432103 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
RTN1-204ENST00000432103 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
RTN1-204ENST00000432103 SLC25A20O43772 301 aa9.42□□□□□ -0.9
RTN1-204ENST00000432103 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
RTN1-204ENST00000432103 SS18Q15532 418 aa9.42□□□□□ -0.9
RTN1-204ENST00000432103 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
RTN1-204ENST00000432103 HUWE1Q7Z6Z7 4374 aaKnown RBP9.41□□□□□ -0.9
RTN1-204ENST00000432103 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
RTN1-204ENST00000432103 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
RTN1-204ENST00000432103 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
RTN1-204ENST00000432103 Q6Q795 121 aa9.4□□□□□ -0.9
RTN1-204ENST00000432103 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
RTN1-204ENST00000432103 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.91
RTN1-204ENST00000432103 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.91
RTN1-204ENST00000432103 UPK3BQ9BT76 320 aa9.4□□□□□ -0.91
RTN1-204ENST00000432103 A4D1N5 150 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms