RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 A0A1W2PRX2 142 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 TMEM258P61165 79 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 ZNF843Q8N446 348 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 NOP10Q9NPE3 64 aaKnown RBP8.03□□□□□ -1.12
USP4-205ENST00000431357 IGSF10Q6WRI0 2623 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 CELSR2Q9HCU4 2923 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 GAGE2AQ6NT46 116 aa8.03□□□□□ -1.12
USP4-205ENST00000431357 COX7CP15954 63 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 HIST2H2BDQ6DRA6 164 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.13
USP4-205ENST00000431357 OVOL2Q9BRP0 275 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 PF4P02776 101 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 C11orf44Q8N8P7 122 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
USP4-205ENST00000431357 TRGV2A0A075B6R0 118 aa8.01□□□□□ -1.13
USP4-205ENST00000431357 TRACP01848 142 aa8.01□□□□□ -1.13
USP4-205ENST00000431357 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
USP4-205ENST00000431357 C16orf95Q9H693 158 aa8.01□□□□□ -1.13
USP4-205ENST00000431357 ACACBO00763 2458 aa8.01□□□□□ -1.13
USP4-205ENST00000431357 A0A0U1RRA0 63 aa8□□□□□ -1.13
USP4-205ENST00000431357 CXCL5P42830 114 aa8□□□□□ -1.13
USP4-205ENST00000431357 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
USP4-205ENST00000431357 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
USP4-205ENST00000431357 PLAC8L1A1L4L8 177 aa8□□□□□ -1.13
USP4-205ENST00000431357 MALP21145 153 aa8□□□□□ -1.13
USP4-205ENST00000431357 FAM222AQ5U5X8 452 aa8□□□□□ -1.13
USP4-205ENST00000431357 TRAV13-2A0A0B4J235 113 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 MAP1AP78559 2803 aaPredicted RBP7.99□□□□□ -1.13
USP4-205ENST00000431357 TRGV4A0A0C4DH28 118 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 DPH3Q96FX2 82 aa7.99□□□□□ -1.13
USP4-205ENST00000431357 MYO18BQ8IUG5 2567 aa7.98□□□□□ -1.13
USP4-205ENST00000431357 FBN2P35556 2912 aa7.98□□□□□ -1.13
USP4-205ENST00000431357 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
USP4-205ENST00000431357 HIST2H2BCQ6DN03 193 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 C3orf56Q8N813 242 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 CSNK1G2-AS1Q8NCQ2 148 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 LINC01006Q8NI28 216 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 C19orf73Q9NVV2 129 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 RNASE1P07998 156 aaKnown RBP7.97□□□□□ -1.13
USP4-205ENST00000431357 RPL35AP18077 110 aaKnown RBP7.97□□□□□ -1.13
USP4-205ENST00000431357 WFDC11Q8NEX6 87 aa7.97□□□□□ -1.13
USP4-205ENST00000431357 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.13
USP4-205ENST00000431357 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.13
USP4-205ENST00000431357 LINC00643Q86TS7 51 aa7.96□□□□□ -1.13
USP4-205ENST00000431357 POLQO75417 2590 aa7.96□□□□□ -1.13
USP4-205ENST00000431357 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.13
USP4-205ENST00000431357 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.13
USP4-205ENST00000431357 FAM208BQ5VWN6 2430 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 ZANQ9Y493 2812 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 LOC100131303A0A0U1RQF7 123 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 ATOX1O00244 68 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 CRPP02741 224 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 FHL2Q14192 279 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 NAV2Q8IVL1 2488 aa7.96□□□□□ -1.14
USP4-205ENST00000431357 BAALC-AS2P0C853 105 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 SEC61GP60059 68 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 IBA57-AS1B1ANH7 110 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 Q5XG85 94 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
USP4-205ENST00000431357 PTPN13Q12923 2485 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 A0A087WZ39 114 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 ZNF462Q96JM2 2506 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 CSMD2Q7Z408 3487 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 LINC00158P58513 81 aa7.93□□□□□ -1.14
USP4-205ENST00000431357 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
USP4-205ENST00000431357 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
USP4-205ENST00000431357 C2orf48Q96LS8 159 aa7.92□□□□□ -1.14
USP4-205ENST00000431357 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
USP4-205ENST00000431357 UBR5O95071 2799 aaPredicted RBP7.91□□□□□ -1.14
USP4-205ENST00000431357 H0YGX0 51 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 HRCT1Q6UXD1 115 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 TEX15Q9BXT5 2789 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 IGKV2-28A0A075B6P5 120 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 NDUFC2-KCTD14E9PQ53 114 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 IGKV2D-28P01615 120 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 HIST1H4AP62805 103 aaKnown RBP7.91□□□□□ -1.14
USP4-205ENST00000431357 C4orf26Q17RF5 130 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 SDIM1Q6ZPB5 146 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 LINC00337Q8N6G1 96 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 FAM218AQ96MZ4 157 aa7.91□□□□□ -1.14
USP4-205ENST00000431357 KLK5Q9Y337 293 aaPredicted RBP7.91□□□□□ -1.14
USP4-205ENST00000431357 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.14
USP4-205ENST00000431357 LRRK2Q5S007 2527 aa7.9□□□□□ -1.14
USP4-205ENST00000431357 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.15
USP4-205ENST00000431357 CCL18P55774 89 aa7.9□□□□□ -1.15
USP4-205ENST00000431357 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.15
USP4-205ENST00000431357 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.15
USP4-205ENST00000431357 V9GYY9 64 aa7.89□□□□□ -1.15
USP4-205ENST00000431357 A0A1B0GUV1 79 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms