RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 DNAJC9-AS1A6NH13 148 aa9.66□□□□□ -0.86
USP42-203ENST00000426246 CCL24O00175 119 aa9.66□□□□□ -0.86
USP42-203ENST00000426246 PAX4O43316 350 aa9.66□□□□□ -0.86
USP42-203ENST00000426246 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
USP42-203ENST00000426246 VSIG2Q96IQ7 327 aa9.66□□□□□ -0.86
USP42-203ENST00000426246 ATP5G1P05496 136 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 DEFB114Q30KQ6 69 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 XCL1P47992 114 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 MAST4O15021 2626 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 TRBV6-5A0A0K0K1A5 114 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 AMELXQ99217 191 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
USP42-203ENST00000426246 SMR3AQ99954 134 aa9.64□□□□□ -0.87
USP42-203ENST00000426246 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
USP42-203ENST00000426246 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
USP42-203ENST00000426246 GAGE2AQ6NT46 116 aa9.63□□□□□ -0.87
USP42-203ENST00000426246 NSD1Q96L73 2696 aaPredicted RBP9.63□□□□□ -0.87
USP42-203ENST00000426246 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 PF4P02776 101 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 SLPIP03973 132 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 DNAL4O96015 105 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 MIAQ16674 131 aa9.61□□□□□ -0.87
USP42-203ENST00000426246 H7C423 109 aa9.6□□□□□ -0.87
USP42-203ENST00000426246 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
USP42-203ENST00000426246 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
USP42-203ENST00000426246 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
USP42-203ENST00000426246 C1orf158Q8N1D5 194 aa9.6□□□□□ -0.87
USP42-203ENST00000426246 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
USP42-203ENST00000426246 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
USP42-203ENST00000426246 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 MGAM2Q2M2H8 2515 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 LINC00482Q8N8I6 264 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 K7EQD1 137 aa9.58□□□□□ -0.88
USP42-203ENST00000426246 STAB1Q9NY15 2570 aa9.57□□□□□ -0.88
USP42-203ENST00000426246 CRPP02741 224 aa9.57□□□□□ -0.88
USP42-203ENST00000426246 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
USP42-203ENST00000426246 A0A0B4J2C4 111 aa9.57□□□□□ -0.88
USP42-203ENST00000426246 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
USP42-203ENST00000426246 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
USP42-203ENST00000426246 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
USP42-203ENST00000426246 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
USP42-203ENST00000426246 LY6G6DO95868 133 aa9.56□□□□□ -0.88
USP42-203ENST00000426246 HERVK_113P63121 156 aa9.56□□□□□ -0.88
USP42-203ENST00000426246 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
USP42-203ENST00000426246 HILS1P60008 231 aa9.55□□□□□ -0.88
USP42-203ENST00000426246 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
USP42-203ENST00000426246 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
USP42-203ENST00000426246 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
USP42-203ENST00000426246 TENM1Q9UKZ4 2725 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 IFITM1P13164 125 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 SOSTDC1Q6X4U4 206 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 C11orf72Q8NBR9 251 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 SMIM20Q8N5G0 67 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 IGKV3D-7A0A0C4DH55 119 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
USP42-203ENST00000426246 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
USP42-203ENST00000426246 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
USP42-203ENST00000426246 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
USP42-203ENST00000426246 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
USP42-203ENST00000426246 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
USP42-203ENST00000426246 GYPEP15421 78 aa9.53□□□□□ -0.88
USP42-203ENST00000426246 LITAFQ99732 161 aa9.53□□□□□ -0.88
USP42-203ENST00000426246 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 Q8N3U1 123 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
USP42-203ENST00000426246 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
USP42-203ENST00000426246 NDUFV3P56181 108 aaKnown RBP9.51□□□□□ -0.89
USP42-203ENST00000426246 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
USP42-203ENST00000426246 LECT2O14960 151 aa9.51□□□□□ -0.89
USP42-203ENST00000426246 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
USP42-203ENST00000426246 ANGP03950 147 aaKnown RBP9.49□□□□□ -0.89
USP42-203ENST00000426246 SCGB1A1P11684 91 aa9.49□□□□□ -0.89
USP42-203ENST00000426246 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
USP42-203ENST00000426246 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
USP42-203ENST00000426246 MALP21145 153 aa9.49□□□□□ -0.89
USP42-203ENST00000426246 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
USP42-203ENST00000426246 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
USP42-203ENST00000426246 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
USP42-203ENST00000426246 LST1O00453 97 aa9.48□□□□□ -0.89
USP42-203ENST00000426246 NDUFA1O15239 70 aa9.48□□□□□ -0.89
USP42-203ENST00000426246 INAFM1C9JVW0 142 aa9.47□□□□□ -0.89
USP42-203ENST00000426246 NCR3O14931 201 aa9.47□□□□□ -0.89
USP42-203ENST00000426246 F5H768 121 aa9.46□□□□□ -0.89
USP42-203ENST00000426246 SDIM1Q6ZPB5 146 aa9.46□□□□□ -0.89
USP42-203ENST00000426246 TRRAPQ9Y4A5 3859 aa9.46□□□□□ -0.89
USP42-203ENST00000426246 A8MTW9 85 aa9.46□□□□□ -0.89
USP42-203ENST00000426246 KRTAP10-3P60369 221 aa9.46□□□□□ -0.89
USP42-203ENST00000426246 PKD1L1Q8TDX9 2849 aa9.46□□□□□ -0.9
USP42-203ENST00000426246 EDA2RQ9HAV5 297 aa9.46□□□□□ -0.9
USP42-203ENST00000426246 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms