RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 G3V3Q6 166 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 KRTAP4-16G5E9R7 235 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-203ENST00000424270 NDUFA1O15239 70 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 CFC1P0CG37 223 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 ZNF25P17030 456 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-203ENST00000424270 H2BFSP57053 126 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 RAB14P61106 215 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 UBE2V1Q13404 147 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 FAM229BQ4G0N7 80 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 C5orf38Q86SI9 138 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 KRTAP3-1Q9BYR8 98 aa3.54□□□□□ -1.84
SDCBP-203ENST00000424270 FXYD6-FXYD2A0A087WZ82 144 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 LINC00862A6NCI5 91 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 H7C423 109 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 PEX7O00628 323 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 BCE1O60756 84 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 SIX6O95475 246 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 PET100P0DJ07 73 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 GCHFRP30047 84 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-203ENST00000424270 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 CLLU1Q5K131 121 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 TMUB2Q71RG4 321 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 SLC51BQ86UW2 128 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 SMIM3Q9BZL3 60 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 WFDC1Q9HC57 220 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 TMEM167BQ9NRX6 74 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 MRPL35Q9NZE8 188 aaKnown RBP3.53□□□□□ -1.84
SDCBP-203ENST00000424270 ZFP30Q9Y2G7 519 aa3.53□□□□□ -1.84
SDCBP-203ENST00000424270 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 MPC2O95563 127 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 UBE2G2P60604 165 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 ZNF345Q14585 488 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 KCNRGQ8N5I3 272 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 ORAOV1Q8WV07 137 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 PPP1R1CQ8WVI7 109 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 SMDT1Q9H4I9 107 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 MED9Q9NWA0 146 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 TNFSF18Q9UNG2 199 aa3.52□□□□□ -1.85
SDCBP-203ENST00000424270 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
SDCBP-203ENST00000424270 TRAV13-1A0A0B4J241 112 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 TEX46H3BTG2 121 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 ARPC5O15511 151 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 NCR2O95944 276 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 CXorf1O96002 111 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 NTF3P20783 257 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 IL15RAQ13261 267 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 TMEM241Q24JQ0 296 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 OR10D4PQ8NGN7 298 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 FMC1Q96HJ9 113 aa3.51□□□□□ -1.85
SDCBP-203ENST00000424270 SNAI2O43623 268 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 PMCHP20382 165 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 CEBPGP53567 150 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 Q6Q795 121 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 UNQ6190/PRO20217Q6UXQ8 127 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 HIST1H2BAQ96A08 127 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 MRAP2Q96G30 205 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
SDCBP-203ENST00000424270 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 RPL37AP8A6NKH3 93 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 TLX1NBP0CAT3 122 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 TRGC1P0CF51 173 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 CTRLP40313 264 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 C3orf22Q8N5N4 141 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 STOML3Q8TAV4 291 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 PACRGQ96M98 296 aaPredicted RBP3.49□□□□□ -1.85
SDCBP-203ENST00000424270 C6orf48Q9UBA6 75 aa3.49□□□□□ -1.85
SDCBP-203ENST00000424270 H0YIZ8 118 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 CXCL1P09341 107 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 AKR1C3P42330 323 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
SDCBP-203ENST00000424270 C9orf129Q5T035 196 aaKnown RBP3.48□□□□□ -1.85
SDCBP-203ENST00000424270 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
SDCBP-203ENST00000424270 COMMD7Q86VX2 200 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
SDCBP-203ENST00000424270 BORCS7-ASMTA0A0B4J1R7 106 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 NDUFC2-KCTD14E9PQ53 114 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 I3L3M4 83 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 LTAP01374 205 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 NPSP0C0P6 89 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 BLOC1S1P78537 153 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 UQCC3Q6UW78 93 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 NKX6-2Q9C056 277 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-203ENST00000424270 ACTR3CQ9C0K3 210 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-203ENST00000424270 CYTL1Q9NRR1 136 aa3.47□□□□□ -1.85
SDCBP-203ENST00000424270 A0A1B0GW15 77 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 SDHAF1A6NFY7 115 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 SMAGPQ0VAQ4 97 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 PNRC1Q12796 327 aaPredicted RBP3.46□□□□□ -1.86
SDCBP-203ENST00000424270 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms