RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 MT-ATP8P03928 68 aa13.25□□□□□ -0.29
RAF1-203ENST00000423275 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
RAF1-203ENST00000423275 FAM19A3Q7Z5A8 133 aa13.25□□□□□ -0.29
RAF1-203ENST00000423275 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
RAF1-203ENST00000423275 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 M0QXV9 152 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 IFITM1P13164 125 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 RPL13AP40429 203 aaKnown RBP13.24□□□□□ -0.29
RAF1-203ENST00000423275 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 CYSRT1A8MQ03 144 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 NTN5Q8WTR8 489 aaPredicted RBP13.24□□□□□ -0.29
RAF1-203ENST00000423275 RNF183Q96D59 192 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
RAF1-203ENST00000423275 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
RAF1-203ENST00000423275 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
RAF1-203ENST00000423275 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
RAF1-203ENST00000423275 F5H768 121 aa13.22□□□□□ -0.29
RAF1-203ENST00000423275 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
RAF1-203ENST00000423275 TMEM243Q9BU79 118 aa13.21□□□□□ -0.29
RAF1-203ENST00000423275 UBE2L6O14933 153 aa13.21□□□□□ -0.3
RAF1-203ENST00000423275 TEX49A0A1B0GTD5 131 aa13.2□□□□□ -0.3
RAF1-203ENST00000423275 COX6CP09669 75 aa13.2□□□□□ -0.3
RAF1-203ENST00000423275 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
RAF1-203ENST00000423275 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
RAF1-203ENST00000423275 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
RAF1-203ENST00000423275 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
RAF1-203ENST00000423275 H7C423 109 aa13.19□□□□□ -0.3
RAF1-203ENST00000423275 VWFP04275 2813 aa13.18□□□□□ -0.3
RAF1-203ENST00000423275 TRGV4A0A0C4DH28 118 aa13.18□□□□□ -0.3
RAF1-203ENST00000423275 TRBV6-4A0A1B0GX49 114 aa13.17□□□□□ -0.3
RAF1-203ENST00000423275 MEIG1Q5JSS6 88 aa13.17□□□□□ -0.3
RAF1-203ENST00000423275 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
RAF1-203ENST00000423275 C2orf82Q6UX34 121 aa13.17□□□□□ -0.3
RAF1-203ENST00000423275 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
RAF1-203ENST00000423275 FN1P02751 2386 aaKnown RBP13.17□□□□□ -0.3
RAF1-203ENST00000423275 LST1O00453 97 aa13.16□□□□□ -0.3
RAF1-203ENST00000423275 LY6G6DO95868 133 aa13.16□□□□□ -0.3
RAF1-203ENST00000423275 GAGE6Q13070 117 aa13.16□□□□□ -0.3
RAF1-203ENST00000423275 FHL2Q14192 279 aa13.16□□□□□ -0.3
RAF1-203ENST00000423275 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
RAF1-203ENST00000423275 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
RAF1-203ENST00000423275 TMEM262E9PQX1 116 aa13.15□□□□□ -0.3
RAF1-203ENST00000423275 PF4P02776 101 aa13.15□□□□□ -0.3
RAF1-203ENST00000423275 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.3
RAF1-203ENST00000423275 OTOGQ6ZRI0 2925 aa13.15□□□□□ -0.3
RAF1-203ENST00000423275 CIDEAO60543 219 aa13.14□□□□□ -0.31
RAF1-203ENST00000423275 UBE2WQ96B02 151 aa13.14□□□□□ -0.31
RAF1-203ENST00000423275 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
RAF1-203ENST00000423275 IGLV4-60A0A075B6I1 120 aa13.13□□□□□ -0.31
RAF1-203ENST00000423275 H3BT86 120 aa13.12□□□□□ -0.31
RAF1-203ENST00000423275 CRLF1O75462 422 aa13.12□□□□□ -0.31
RAF1-203ENST00000423275 DEFB130BP0DP73 79 aa13.12□□□□□ -0.31
RAF1-203ENST00000423275 DEFB130AP0DP74 79 aa13.12□□□□□ -0.31
RAF1-203ENST00000423275 CKS1BP61024 79 aa13.12□□□□□ -0.31
RAF1-203ENST00000423275 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
RAF1-203ENST00000423275 A0A1B0GV72 72 aa13.11□□□□□ -0.31
RAF1-203ENST00000423275 HERV-K104P63124 156 aa13.11□□□□□ -0.31
RAF1-203ENST00000423275 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
RAF1-203ENST00000423275 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
RAF1-203ENST00000423275 COPS9Q8WXC6 57 aa13.08□□□□□ -0.32
RAF1-203ENST00000423275 SHISA2Q6UWI4 295 aa13.08□□□□□ -0.32
RAF1-203ENST00000423275 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
RAF1-203ENST00000423275 FLNBO75369 2602 aaKnown RBP13.07□□□□□ -0.32
RAF1-203ENST00000423275 TRAV8-4A0A0B4J246 113 aa13.07□□□□□ -0.32
RAF1-203ENST00000423275 INAFM1C9JVW0 142 aa13.07□□□□□ -0.32
RAF1-203ENST00000423275 COX7A2LO14548 114 aa13.07□□□□□ -0.32
RAF1-203ENST00000423275 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
RAF1-203ENST00000423275 X6R8D5 127 aa13.06□□□□□ -0.32
RAF1-203ENST00000423275 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
RAF1-203ENST00000423275 MIR7-3HGQ8N6C7 128 aa13.05□□□□□ -0.32
RAF1-203ENST00000423275 KIR2DL5BQ8NHK3 375 aa13.05□□□□□ -0.32
RAF1-203ENST00000423275 CITED1Q99966 193 aa13.05□□□□□ -0.32
RAF1-203ENST00000423275 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
RAF1-203ENST00000423275 NSD1Q96L73 2696 aaPredicted RBP13.03□□□□□ -0.32
RAF1-203ENST00000423275 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
RAF1-203ENST00000423275 GYPEP15421 78 aa13.01□□□□□ -0.33
RAF1-203ENST00000423275 SNCGO76070 127 aa13.01□□□□□ -0.33
RAF1-203ENST00000423275 FAM218AQ96MZ4 157 aa13.01□□□□□ -0.33
RAF1-203ENST00000423275 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
RAF1-203ENST00000423275 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
RAF1-203ENST00000423275 A0A087WZ39 114 aa13□□□□□ -0.33
RAF1-203ENST00000423275 DEFB4AO15263 64 aa13□□□□□ -0.33
RAF1-203ENST00000423275 IGKV2D-28P01615 120 aa13□□□□□ -0.33
RAF1-203ENST00000423275 LINC00158P58513 81 aa13□□□□□ -0.33
RAF1-203ENST00000423275 A0A096LPF7 62 aa12.99□□□□□ -0.33
RAF1-203ENST00000423275 LINC00959A0A1B0GUT2 108 aa12.99□□□□□ -0.33
RAF1-203ENST00000423275 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
RAF1-203ENST00000423275 SND1-IT1Q9HBX3 110 aa12.99□□□□□ -0.33
RAF1-203ENST00000423275 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
RAF1-203ENST00000423275 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
RAF1-203ENST00000423275 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
RAF1-203ENST00000423275 CRPP02741 224 aa12.98□□□□□ -0.33
RAF1-203ENST00000423275 PFN2P35080 140 aa12.97□□□□□ -0.33
RAF1-203ENST00000423275 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
RAF1-203ENST00000423275 TRAV13-2A0A0B4J235 113 aa12.96□□□□□ -0.33
RAF1-203ENST00000423275 DEFB135Q30KP9 77 aa12.96□□□□□ -0.33
RAF1-203ENST00000423275 C9orf66Q5T8R8 295 aa12.96□□□□□ -0.33
RAF1-203ENST00000423275 CLPSL2Q6UWE3 100 aa12.96□□□□□ -0.33
RAF1-203ENST00000423275 TRRAPQ9Y4A5 3859 aa12.96□□□□□ -0.33
RAF1-203ENST00000423275 XCL1P47992 114 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms