RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CHCHD5Q9BSY4 110 aa7.79□□□□□ -1.16
DDX56-203ENST00000421223 TINCRA0A1B0GVN0 87 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 DAZ2Q13117 558 aaKnown RBP7.78□□□□□ -1.16
DDX56-203ENST00000421223 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 VSIG2Q96IQ7 327 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 C1orf43Q9BWL3 253 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 UBE2D3P61077 147 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 UBE2D2P62837 147 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 IL17DQ8TAD2 202 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
DDX56-203ENST00000421223 DAZ4Q86SG3 579 aaKnown RBP7.77□□□□□ -1.17
DDX56-203ENST00000421223 DAZ3Q9NR90 486 aaKnown RBP7.77□□□□□ -1.17
DDX56-203ENST00000421223 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
DDX56-203ENST00000421223 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
DDX56-203ENST00000421223 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
DDX56-203ENST00000421223 TMEM262E9PQX1 116 aa7.77□□□□□ -1.17
DDX56-203ENST00000421223 TMEM101Q96IK0 257 aa7.77□□□□□ -1.17
DDX56-203ENST00000421223 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
DDX56-203ENST00000421223 TRRAPQ9Y4A5 3859 aa7.76□□□□□ -1.17
DDX56-203ENST00000421223 Q9H8V8 135 aa7.76□□□□□ -1.17
DDX56-203ENST00000421223 HTN3P15516 51 aa7.75□□□□□ -1.17
DDX56-203ENST00000421223 FHL2Q14192 279 aa7.75□□□□□ -1.17
DDX56-203ENST00000421223 MEIG1Q5JSS6 88 aa7.75□□□□□ -1.17
DDX56-203ENST00000421223 CLPSL2Q6UWE3 100 aa7.75□□□□□ -1.17
DDX56-203ENST00000421223 GYPEP15421 78 aa7.74□□□□□ -1.17
DDX56-203ENST00000421223 SMCPP49901 116 aaPredicted RBP7.74□□□□□ -1.17
DDX56-203ENST00000421223 CDC42SE2Q9NRR3 84 aa7.74□□□□□ -1.17
DDX56-203ENST00000421223 EIF4EBP3O60516 100 aaPredicted RBP7.73□□□□□ -1.17
DDX56-203ENST00000421223 HERVK_113P63121 156 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 TCL1BO95988 128 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 PRIMA1Q86XR5 153 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 C11orf68Q9H3H3 251 aaKnown RBP7.73□□□□□ -1.17
DDX56-203ENST00000421223 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
DDX56-203ENST00000421223 CCDC179H3BU77 68 aa7.72□□□□□ -1.17
DDX56-203ENST00000421223 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
DDX56-203ENST00000421223 J3QR89 54 aa7.72□□□□□ -1.17
DDX56-203ENST00000421223 C5orf38Q86SI9 138 aa7.72□□□□□ -1.17
DDX56-203ENST00000421223 MAST4O15021 2626 aa7.72□□□□□ -1.17
DDX56-203ENST00000421223 SPATA25Q9BR10 227 aa7.71□□□□□ -1.17
DDX56-203ENST00000421223 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
DDX56-203ENST00000421223 TIRAPP58753 221 aa7.71□□□□□ -1.18
DDX56-203ENST00000421223 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
DDX56-203ENST00000421223 ZFAND6Q6FIF0 208 aa7.71□□□□□ -1.18
DDX56-203ENST00000421223 C3orf56Q8N813 242 aa7.71□□□□□ -1.18
DDX56-203ENST00000421223 TRBV6-8A0A0A6YYG3 113 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 ATP6V0E2Q8NHE4 81 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 LITAFQ99732 161 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
DDX56-203ENST00000421223 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 X6R8D5 127 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 LYRM7Q5U5X0 104 aa7.7□□□□□ -1.18
DDX56-203ENST00000421223 MIAQ16674 131 aa7.69□□□□□ -1.18
DDX56-203ENST00000421223 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
DDX56-203ENST00000421223 C9JAW5 83 aa7.69□□□□□ -1.18
DDX56-203ENST00000421223 PAX4O43316 350 aa7.69□□□□□ -1.18
DDX56-203ENST00000421223 FOXI1Q12951 378 aa7.69□□□□□ -1.18
DDX56-203ENST00000421223 TRBV20-1A0A075B6N2 111 aa7.68□□□□□ -1.18
DDX56-203ENST00000421223 XCL1P47992 114 aa7.68□□□□□ -1.18
DDX56-203ENST00000421223 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
DDX56-203ENST00000421223 KIR2DL5BQ8NHK3 375 aa7.68□□□□□ -1.18
DDX56-203ENST00000421223 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 A0A0B4J2C4 111 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 NDUFA1O15239 70 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 DAD1P61803 113 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 IGLV10-54A0A075B6I4 117 aa7.67□□□□□ -1.18
DDX56-203ENST00000421223 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
DDX56-203ENST00000421223 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 TRIAP1O43715 76 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 PFN2P35080 140 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 Q8N3U1 123 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
DDX56-203ENST00000421223 FAM19A5Q7Z5A7 132 aaPredicted RBP7.65□□□□□ -1.18
DDX56-203ENST00000421223 CLEC2BQ92478 149 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 CELA1Q9UNI1 258 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 APOC4P55056 127 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 LINC00158P58513 81 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
DDX56-203ENST00000421223 IGLV5-39A0A0G2JS06 123 aa7.65□□□□□ -1.19
DDX56-203ENST00000421223 TEN1Q86WV5 123 aa7.65□□□□□ -1.19
DDX56-203ENST00000421223 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
DDX56-203ENST00000421223 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
DDX56-203ENST00000421223 IGHV4-30-4P0DP06 118 aa7.64□□□□□ -1.19
DDX56-203ENST00000421223 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
DDX56-203ENST00000421223 ICOSQ9Y6W8 199 aa7.64□□□□□ -1.19
DDX56-203ENST00000421223 SLC25A20O43772 301 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 SOSTDC1Q6X4U4 206 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 MRAPQ8TCY5 172 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 PPDPFLQ8WWR9 84 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms