RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PMCHP20382 165 aa4.92□□□□□ -1.62
TRIM39-206ENST00000420746 UBE2AP49459 152 aa4.92□□□□□ -1.62
TRIM39-206ENST00000420746 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
TRIM39-206ENST00000420746 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
TRIM39-206ENST00000420746 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
TRIM39-206ENST00000420746 XKRY2A2RUG3 117 aa4.91□□□□□ -1.62
TRIM39-206ENST00000420746 INMT-MINDY4F8WBC2 141 aa4.91□□□□□ -1.62
TRIM39-206ENST00000420746 IL7P13232 177 aa4.91□□□□□ -1.62
TRIM39-206ENST00000420746 CNFNQ9BYD5 112 aa4.91□□□□□ -1.62
TRIM39-206ENST00000420746 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
TRIM39-206ENST00000420746 UPK1BO75841 260 aa4.9□□□□□ -1.63
TRIM39-206ENST00000420746 H2BFSP57053 126 aa4.9□□□□□ -1.63
TRIM39-206ENST00000420746 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
TRIM39-206ENST00000420746 KIAA0087Q14695 138 aa4.9□□□□□ -1.63
TRIM39-206ENST00000420746 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.63
TRIM39-206ENST00000420746 RAB19A4D1S5 217 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 CST9LP1Q5W188 147 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 LYZL1Q6UWQ5 148 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 C9orf62Q8N4C0 152 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 NEBP20929 6669 aa4.89□□□□□ -1.63
TRIM39-206ENST00000420746 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
TRIM39-206ENST00000420746 FOXA3P55318 350 aaPredicted RBP4.88□□□□□ -1.63
TRIM39-206ENST00000420746 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
TRIM39-206ENST00000420746 LINC00167Q96N53 147 aa4.88□□□□□ -1.63
TRIM39-206ENST00000420746 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
TRIM39-206ENST00000420746 TWIST1Q15672 202 aa4.87□□□□□ -1.63
TRIM39-206ENST00000420746 Q6ZUT4 128 aa4.87□□□□□ -1.63
TRIM39-206ENST00000420746 MARVELD1Q9BSK0 173 aa4.87□□□□□ -1.63
TRIM39-206ENST00000420746 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
TRIM39-206ENST00000420746 RNASE7Q9H1E1 156 aaKnown RBP4.87□□□□□ -1.63
TRIM39-206ENST00000420746 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 IFNA1P01562 189 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
TRIM39-206ENST00000420746 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 C2orf82Q6UX34 121 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 SMIM15Q7Z3B0 74 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 Q8N377 158 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 Q8NBF4 154 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 ST20Q9HBF5 79 aa4.86□□□□□ -1.63
TRIM39-206ENST00000420746 MAP1LC3B2A6NCE7 125 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 SLC25A20O43772 301 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
TRIM39-206ENST00000420746 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 GNB1LQ9BYB4 327 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 MAP1LC3BQ9GZQ8 125 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 XAGE1AQ9HD64 81 aa4.85□□□□□ -1.63
TRIM39-206ENST00000420746 FAM240BA0A1B0GVZ2 78 aa4.84□□□□□ -1.63
TRIM39-206ENST00000420746 PAGE4O60829 102 aa4.84□□□□□ -1.63
TRIM39-206ENST00000420746 TMUB2Q71RG4 321 aa4.84□□□□□ -1.63
TRIM39-206ENST00000420746 SMIM12Q96EX1 92 aa4.84□□□□□ -1.63
TRIM39-206ENST00000420746 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
TRIM39-206ENST00000420746 TGIF2-C20orf24A0A0A6YYL0 155 aa4.83□□□□□ -1.64
TRIM39-206ENST00000420746 PFDN1O60925 122 aa4.83□□□□□ -1.64
TRIM39-206ENST00000420746 RPL35P42766 123 aaKnown RBP4.83□□□□□ -1.64
TRIM39-206ENST00000420746 DEFA1P59665 94 aa4.83□□□□□ -1.64
TRIM39-206ENST00000420746 TMEM18Q96B42 140 aa4.83□□□□□ -1.64
TRIM39-206ENST00000420746 FCER1GP30273 86 aa4.82□□□□□ -1.64
TRIM39-206ENST00000420746 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
TRIM39-206ENST00000420746 PRLHP81277 87 aa4.82□□□□□ -1.64
TRIM39-206ENST00000420746 AKR1C8PQ5T2L2 129 aa4.82□□□□□ -1.64
TRIM39-206ENST00000420746 LINC01561Q8N1V8 128 aa4.82□□□□□ -1.64
TRIM39-206ENST00000420746 VCYO14598 125 aa4.81□□□□□ -1.64
TRIM39-206ENST00000420746 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
TRIM39-206ENST00000420746 SPRR4Q96PI1 79 aa4.81□□□□□ -1.64
TRIM39-206ENST00000420746 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 HBBP68871 147 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 MRPS36P82909 103 aaKnown RBP4.8□□□□□ -1.64
TRIM39-206ENST00000420746 FAM19A1Q7Z5A9 133 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 CBLN2Q8IUK8 224 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 FAM104AQ969W3 186 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
TRIM39-206ENST00000420746 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
TRIM39-206ENST00000420746 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
TRIM39-206ENST00000420746 BORCS7-ASMTA0A0B4J1R7 106 aa4.79□□□□□ -1.64
TRIM39-206ENST00000420746 IFITM10A6NMD0 228 aa4.79□□□□□ -1.64
TRIM39-206ENST00000420746 CKS1BP61024 79 aa4.79□□□□□ -1.64
TRIM39-206ENST00000420746 CENPWQ5EE01 88 aa4.79□□□□□ -1.64
TRIM39-206ENST00000420746 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
TRIM39-206ENST00000420746 PRSS2P07478 247 aa4.78□□□□□ -1.64
TRIM39-206ENST00000420746 RPL7L1Q6DKI1 246 aaKnown RBP4.78□□□□□ -1.64
TRIM39-206ENST00000420746 NKAPP1Q8N9T2 125 aa4.78□□□□□ -1.64
TRIM39-206ENST00000420746 TMEM126AQ9H061 195 aa4.78□□□□□ -1.64
TRIM39-206ENST00000420746 SPANXA1Q9NS26 97 aa4.78□□□□□ -1.64
TRIM39-206ENST00000420746 IGKV2-28A0A075B6P5 120 aa4.77□□□□□ -1.65
TRIM39-206ENST00000420746 PPP1R17O96001 155 aa4.77□□□□□ -1.65
TRIM39-206ENST00000420746 IGKV2D-28P01615 120 aa4.77□□□□□ -1.65
TRIM39-206ENST00000420746 Q8IZM0 81 aa4.77□□□□□ -1.65
TRIM39-206ENST00000420746 F8VRH5 84 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 TCAPO15273 167 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 SSNA1O43805 119 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 GNG4P50150 75 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 CCL20P78556 96 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 C6orf226Q5I0X4 101 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 LINC01551Q86U37 167 aa4.76□□□□□ -1.65
TRIM39-206ENST00000420746 SUMO2P61956 95 aaKnown RBP4.75□□□□□ -1.65
TRIM39-206ENST00000420746 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
TRIM39-206ENST00000420746 NUDT10Q8NFP7 164 aa4.75□□□□□ -1.65
TRIM39-206ENST00000420746 ENKURQ8TC29 256 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms