RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.68□□□□□ -2.3
LINC01646-201ENST00000420522 DPH3Q96FX2 82 aa0.68□□□□□ -2.3
LINC01646-201ENST00000420522 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
LINC01646-201ENST00000420522 PFDN1O60925 122 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 NBEAP1P0C6P0 100 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 SDC2P34741 201 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 FXYD4P59646 89 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 RPL37AP61513 92 aaKnown RBP0.67□□□□□ -2.3
LINC01646-201ENST00000420522 DEFB110Q30KQ9 67 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 OR5H6Q8NGV6 325 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 PYDC1Q8WXC3 89 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 LINC01600Q96MT4 127 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 BATF3Q9NR55 127 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 C19orf12Q9NSK7 152 aa0.67□□□□□ -2.3
LINC01646-201ENST00000420522 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 CXorf51AA0A1B0GTR3 108 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 TSTD3H0UI37 97 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 ARPC5O15511 151 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 TRACP01848 142 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 NDUFA6P56556 154 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 ARPC4P59998 168 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 ALX1Q15699 326 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 TMEM128Q5BJH2 165 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 SAMD13Q5VXD3 122 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 COX6B2Q6YFQ2 88 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 DEFB108BQ8NET1 73 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 PRELID3AQ96N28 172 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 LXNQ9BS40 222 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
LINC01646-201ENST00000420522 PRORSD1PA6NEY8 169 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 A6NN06 94 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 ZNF727A8MUV8 499 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 C5orf58C9J3I9 102 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 RPL7P18124 248 aaKnown RBP0.65□□□□□ -2.31
LINC01646-201ENST00000420522 PDE6GP18545 87 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 MAXP61244 160 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 SPINK9Q5DT21 86 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 HRCT1Q6UXD1 115 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 CASC2Q6XLA1 102 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 ATOH7Q8N100 152 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 OR5AK2Q8NH90 309 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 THEM6Q8WUY1 208 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 LCN9Q8WX39 176 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 CLEC2BQ92478 149 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 NIT2Q9NQR4 276 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 TRAPPC2LQ9UL33 140 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 MED31Q9Y3C7 131 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 HSPB11Q9Y547 144 aa0.65□□□□□ -2.31
LINC01646-201ENST00000420522 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
LINC01646-201ENST00000420522 TRBV27A0A0K0K1C4 114 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 NBDYA0A0U1RRE5 68 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 ATP6V1G2-DDX39BF2Z307 99 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 H3BUX3 64 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 FAM107AO95990 144 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 TPT1P13693 172 aaKnown RBP0.64□□□□□ -2.31
LINC01646-201ENST00000420522 RPS3P23396 243 aaKnown RBP eCLIP0.64□□□□□ -2.31
LINC01646-201ENST00000420522 NEDD8Q15843 81 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 LINC00305Q7Z4B0 112 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 TMEM35BQ8NCS4 154 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 MAFIPQ8WZ33 124 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 CCDC115Q96NT0 180 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 AIF1LQ9BQI0 150 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 GSKIPQ9P0R6 139 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 DSPPQ9NZW4 1301 aa0.64□□□□□ -2.31
LINC01646-201ENST00000420522 A0A0D9SG42 100 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 C3orf85A0A1B0GTC6 90 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 FAM92AA1XBS5 289 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 SAA1P0DJI8 122 aaPredicted RBP0.63□□□□□ -2.31
LINC01646-201ENST00000420522 POLR2HP52434 150 aaKnown RBP0.63□□□□□ -2.31
LINC01646-201ENST00000420522 SARNPP82979 210 aaKnown RBP0.63□□□□□ -2.31
LINC01646-201ENST00000420522 OR8B8Q15620 311 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 TOMM20LQ6UXN7 152 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 Q6ZQY7 126 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 OR9Q1Q8NGQ5 310 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 SKA2Q8WVK7 121 aaPredicted RBP0.63□□□□□ -2.31
LINC01646-201ENST00000420522 LZICQ8WZA0 190 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 COX14Q96I36 57 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 FAM107BQ9H098 131 aa0.63□□□□□ -2.31
LINC01646-201ENST00000420522 DEFB131BA0A096LNP1 70 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 A0A0G2JMM0 328 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 TRBV7-6A0A0J9YX20 115 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 A0A1W2PPB8 328 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 A0A1W2PRS3 328 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 KIR3DP1A8MWS1 328 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 J3KT08 172 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 M0QZK8 103 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 DEGS1O15121 323 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 IGHV3-30P01768 117 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 MT2AP02795 61 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 MT1FP04733 61 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 IGHV3-30-5P0DP03 117 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 SCGB1A1P11684 91 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 CMPK1P30085 196 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 SDC4P31431 198 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 CCL18P55774 89 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 CKS1BP61024 79 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 PSPHP78330 225 aa0.62□□□□□ -2.31
LINC01646-201ENST00000420522 RBM3P98179 157 aaKnown RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms