RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 HIST1H2BJP06899 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 PRSS1P07477 247 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BOP23527 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BBP33778 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BDP58876 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 LINC00310P59036 64 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BCP62807 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 SEC11AP67812 179 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST2H2BEQ16778 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BHQ93079 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BNQ99877 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 HIST1H2BMQ99879 126 aa12.95□□□□□ -0.34
FAM3A-207ENST00000416319 GVQW2A0A096LPI5 108 aaPredicted RBP12.94□□□□□ -0.34
FAM3A-207ENST00000416319 SERF1AO75920 110 aa12.94□□□□□ -0.34
FAM3A-207ENST00000416319 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
FAM3A-207ENST00000416319 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
FAM3A-207ENST00000416319 PMVKQ15126 192 aa12.93□□□□□ -0.34
FAM3A-207ENST00000416319 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.92□□□□□ -0.34
FAM3A-207ENST00000416319 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
FAM3A-207ENST00000416319 MALP21145 153 aa12.92□□□□□ -0.34
FAM3A-207ENST00000416319 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
FAM3A-207ENST00000416319 HERVK_113P63121 156 aa12.91□□□□□ -0.34
FAM3A-207ENST00000416319 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
FAM3A-207ENST00000416319 LINC01561Q8N1V8 128 aa12.91□□□□□ -0.34
FAM3A-207ENST00000416319 A0A087WZ39 114 aa12.9□□□□□ -0.34
FAM3A-207ENST00000416319 APOMO95445 188 aa12.9□□□□□ -0.34
FAM3A-207ENST00000416319 GCSHP23434 173 aa12.9□□□□□ -0.34
FAM3A-207ENST00000416319 FUSP35637 526 aaKnown RBP eCLIP12.9□□□□□ -0.34
FAM3A-207ENST00000416319 COX6A2Q02221 97 aa12.9□□□□□ -0.34
FAM3A-207ENST00000416319 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
FAM3A-207ENST00000416319 TINCRA0A1B0GVN0 87 aa12.88□□□□□ -0.35
FAM3A-207ENST00000416319 NUPR1O60356 82 aa12.88□□□□□ -0.35
FAM3A-207ENST00000416319 DNAH8Q96JB1 4490 aa12.88□□□□□ -0.35
FAM3A-207ENST00000416319 IGHV3-64A0A075B6Q5 118 aa12.87□□□□□ -0.35
FAM3A-207ENST00000416319 A0A0J9YXV3 536 aa12.87□□□□□ -0.35
FAM3A-207ENST00000416319 HIGD2BQ4VC39 106 aa12.87□□□□□ -0.35
FAM3A-207ENST00000416319 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
FAM3A-207ENST00000416319 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
FAM3A-207ENST00000416319 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
FAM3A-207ENST00000416319 GEMIN7Q9H840 131 aaKnown RBP12.87□□□□□ -0.35
FAM3A-207ENST00000416319 KIAA1109Q2LD37 5005 aa12.86□□□□□ -0.35
FAM3A-207ENST00000416319 APOBP04114 4563 aaKnown RBP12.86□□□□□ -0.35
FAM3A-207ENST00000416319 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.85□□□□□ -0.35
FAM3A-207ENST00000416319 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 ZNF561-AS1K7EIQ3 104 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 SLPIP03973 132 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 C9orf163Q8N9P6 203 aa12.85□□□□□ -0.35
FAM3A-207ENST00000416319 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
FAM3A-207ENST00000416319 NDUFA6P56556 154 aa12.84□□□□□ -0.35
FAM3A-207ENST00000416319 KRTAP10-1P60331 282 aa12.84□□□□□ -0.35
FAM3A-207ENST00000416319 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
FAM3A-207ENST00000416319 RYR1P21817 5038 aa12.84□□□□□ -0.35
FAM3A-207ENST00000416319 F8WDY8 70 aa12.83□□□□□ -0.36
FAM3A-207ENST00000416319 C2orf48Q96LS8 159 aa12.83□□□□□ -0.36
FAM3A-207ENST00000416319 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
FAM3A-207ENST00000416319 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
FAM3A-207ENST00000416319 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
FAM3A-207ENST00000416319 ORAOV1Q8WV07 137 aa12.82□□□□□ -0.36
FAM3A-207ENST00000416319 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
FAM3A-207ENST00000416319 LINC00469Q8N7U9 141 aa12.81□□□□□ -0.36
FAM3A-207ENST00000416319 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
FAM3A-207ENST00000416319 SYCNQ0VAF6 134 aa12.79□□□□□ -0.36
FAM3A-207ENST00000416319 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
FAM3A-207ENST00000416319 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
FAM3A-207ENST00000416319 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
FAM3A-207ENST00000416319 H3BRM9 83 aa12.78□□□□□ -0.36
FAM3A-207ENST00000416319 KIAA0087Q14695 138 aa12.78□□□□□ -0.36
FAM3A-207ENST00000416319 Q6ZSA8 131 aa12.78□□□□□ -0.36
FAM3A-207ENST00000416319 FABP4P15090 132 aa12.77□□□□□ -0.37
FAM3A-207ENST00000416319 LINC01620Q4KN68 170 aa12.77□□□□□ -0.37
FAM3A-207ENST00000416319 SDIM1Q6ZPB5 146 aa12.77□□□□□ -0.37
FAM3A-207ENST00000416319 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
FAM3A-207ENST00000416319 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
FAM3A-207ENST00000416319 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
FAM3A-207ENST00000416319 F8VRH5 84 aa12.76□□□□□ -0.37
FAM3A-207ENST00000416319 Q8IZM0 81 aa12.76□□□□□ -0.37
FAM3A-207ENST00000416319 PKIGQ9Y2B9 76 aa12.76□□□□□ -0.37
FAM3A-207ENST00000416319 ZNF22P17026 224 aaPredicted RBP12.75□□□□□ -0.37
FAM3A-207ENST00000416319 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
FAM3A-207ENST00000416319 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
FAM3A-207ENST00000416319 HSPG2P98160 4391 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 C11orf86A6NJI1 115 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 NDUFA1O15239 70 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 ODF1Q14990 250 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 Q6ZRU5 148 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 HERC2O95714 4834 aa12.74□□□□□ -0.37
FAM3A-207ENST00000416319 PRSS2P07478 247 aa12.73□□□□□ -0.37
FAM3A-207ENST00000416319 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
FAM3A-207ENST00000416319 FAM30AQ9NZY2 134 aa12.72□□□□□ -0.37
FAM3A-207ENST00000416319 SPINK8P0C7L1 97 aa12.71□□□□□ -0.37
FAM3A-207ENST00000416319 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
FAM3A-207ENST00000416319 PLNP26678 52 aa12.7□□□□□ -0.38
FAM3A-207ENST00000416319 CXCL5P42830 114 aa12.7□□□□□ -0.38
FAM3A-207ENST00000416319 XGP55808 180 aa12.7□□□□□ -0.38
FAM3A-207ENST00000416319 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
FAM3A-207ENST00000416319 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms