RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 TRAV23DV6A0A075B6W5 121 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 LINC00310P59036 64 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 KLLNB2CW77 178 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 TRIAP1O43715 76 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 TSHBP01222 138 aa11.41□□□□□ -0.58
PHRF1-203ENST00000416188 BRI3O95415 125 aa11.4□□□□□ -0.58
PHRF1-203ENST00000416188 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
PHRF1-203ENST00000416188 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
PHRF1-203ENST00000416188 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.58
PHRF1-203ENST00000416188 A0A087WZ39 114 aa11.4□□□□□ -0.59
PHRF1-203ENST00000416188 KRTAP24-1Q3LI83 254 aa11.4□□□□□ -0.59
PHRF1-203ENST00000416188 C2orf91Q6ZV80 131 aa11.4□□□□□ -0.59
PHRF1-203ENST00000416188 DCANP1Q8TF63 244 aa11.4□□□□□ -0.59
PHRF1-203ENST00000416188 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.59
PHRF1-203ENST00000416188 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
PHRF1-203ENST00000416188 EDN2P20800 178 aa11.39□□□□□ -0.59
PHRF1-203ENST00000416188 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
PHRF1-203ENST00000416188 ANKRD17O75179 2603 aaKnown RBP11.38□□□□□ -0.59
PHRF1-203ENST00000416188 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
PHRF1-203ENST00000416188 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
PHRF1-203ENST00000416188 FAM19A5Q7Z5A7 132 aaPredicted RBP11.37□□□□□ -0.59
PHRF1-203ENST00000416188 LRCOL1A6NCL2 159 aa11.37□□□□□ -0.59
PHRF1-203ENST00000416188 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
PHRF1-203ENST00000416188 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
PHRF1-203ENST00000416188 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
PHRF1-203ENST00000416188 PTPRBP23467 1997 aa11.36□□□□□ -0.59
PHRF1-203ENST00000416188 C9orf85Q96MD7 179 aa11.35□□□□□ -0.59
PHRF1-203ENST00000416188 ZNF580Q9UK33 172 aa11.35□□□□□ -0.59
PHRF1-203ENST00000416188 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
PHRF1-203ENST00000416188 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
PHRF1-203ENST00000416188 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
PHRF1-203ENST00000416188 TRBV30A0A0K0K1B3 111 aa11.34□□□□□ -0.59
PHRF1-203ENST00000416188 NDUFV3P56181 108 aaKnown RBP11.34□□□□□ -0.59
PHRF1-203ENST00000416188 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.59
PHRF1-203ENST00000416188 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.59
PHRF1-203ENST00000416188 J3KT08 172 aa11.33□□□□□ -0.6
PHRF1-203ENST00000416188 IGKV2-28A0A075B6P5 120 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 IGKV2D-28P01615 120 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 IGKV4-1P06312 121 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 C20orf197Q8N268 126 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
PHRF1-203ENST00000416188 LELP1Q5T871 98 aa11.31□□□□□ -0.6
PHRF1-203ENST00000416188 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
PHRF1-203ENST00000416188 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
PHRF1-203ENST00000416188 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
PHRF1-203ENST00000416188 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 CCKP06307 115 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 Q6ZQY7 126 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 Q6ZTC4 211 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 TIMM17BO60830 172 aa11.29□□□□□ -0.6
PHRF1-203ENST00000416188 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
PHRF1-203ENST00000416188 UBE2D1P51668 147 aa11.28□□□□□ -0.6
PHRF1-203ENST00000416188 MRPS36P82909 103 aaKnown RBP11.27□□□□□ -0.6
PHRF1-203ENST00000416188 Q8N2B8 174 aa11.27□□□□□ -0.61
PHRF1-203ENST00000416188 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
PHRF1-203ENST00000416188 UBE2D3P61077 147 aa11.26□□□□□ -0.61
PHRF1-203ENST00000416188 UBE2D2P62837 147 aa11.26□□□□□ -0.61
PHRF1-203ENST00000416188 C3orf84H3BNL1 204 aa11.26□□□□□ -0.61
PHRF1-203ENST00000416188 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
PHRF1-203ENST00000416188 PPDPFQ9H3Y8 114 aa11.26□□□□□ -0.61
PHRF1-203ENST00000416188 CDC42SE2Q9NRR3 84 aa11.25□□□□□ -0.61
PHRF1-203ENST00000416188 IGIPA6NJ69 53 aa11.24□□□□□ -0.61
PHRF1-203ENST00000416188 SMIM11BQ8TCY0 68 aa11.23□□□□□ -0.61
PHRF1-203ENST00000416188 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
PHRF1-203ENST00000416188 LST1O00453 97 aa11.23□□□□□ -0.61
PHRF1-203ENST00000416188 M0R378 163 aa11.22□□□□□ -0.61
PHRF1-203ENST00000416188 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
PHRF1-203ENST00000416188 UQCRQO14949 82 aa11.22□□□□□ -0.61
PHRF1-203ENST00000416188 WFDC10BQ8IUB3 73 aa11.22□□□□□ -0.61
PHRF1-203ENST00000416188 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
PHRF1-203ENST00000416188 RPL37AP8A6NKH3 93 aa11.21□□□□□ -0.61
PHRF1-203ENST00000416188 NDUFC2O95298 119 aa11.21□□□□□ -0.62
PHRF1-203ENST00000416188 XGP55808 180 aa11.21□□□□□ -0.62
PHRF1-203ENST00000416188 EXPH5Q8NEV8 1989 aa11.21□□□□□ -0.62
PHRF1-203ENST00000416188 CYSRT1A8MQ03 144 aa11.2□□□□□ -0.62
PHRF1-203ENST00000416188 USP17L23D6RBM5 183 aa11.2□□□□□ -0.62
PHRF1-203ENST00000416188 DNAH12Q6ZR08 3092 aa11.2□□□□□ -0.62
PHRF1-203ENST00000416188 FHL3Q13643 280 aa11.2□□□□□ -0.62
PHRF1-203ENST00000416188 Q8IZM0 81 aa11.19□□□□□ -0.62
PHRF1-203ENST00000416188 SPINK6Q6UWN8 80 aa11.18□□□□□ -0.62
PHRF1-203ENST00000416188 ZNF73O43830 326 aaPredicted RBP11.17□□□□□ -0.62
PHRF1-203ENST00000416188 UNQ6190/PRO20217Q6UXQ8 127 aa11.17□□□□□ -0.62
PHRF1-203ENST00000416188 C1orf134Q5TEV5 83 aa11.17□□□□□ -0.62
PHRF1-203ENST00000416188 SEC61GP60059 68 aa11.17□□□□□ -0.62
PHRF1-203ENST00000416188 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
PHRF1-203ENST00000416188 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
PHRF1-203ENST00000416188 BRK1Q8WUW1 75 aa11.15□□□□□ -0.62
PHRF1-203ENST00000416188 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
PHRF1-203ENST00000416188 COX17Q14061 63 aa11.15□□□□□ -0.62
PHRF1-203ENST00000416188 WFDC13Q8IUB5 93 aa11.15□□□□□ -0.63
PHRF1-203ENST00000416188 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.63
PHRF1-203ENST00000416188 FAM236DA0A1B0GTK5 79 aa11.14□□□□□ -0.63
PHRF1-203ENST00000416188 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
PHRF1-203ENST00000416188 FAM236CP0DP71 79 aa11.14□□□□□ -0.63
PHRF1-203ENST00000416188 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms