RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 S100PP25815 95 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 YPEL3P61236 119 aaPredicted RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 DEFB121Q5J5C9 76 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 Q5W150 140 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 PATE2Q6UY27 113 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 NUP35Q8NFH5 326 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 OR10D4PQ8NGN7 298 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 RMI2Q96E14 147 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 FAM167A-AS1Q96KT0 104 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 TUBA4BQ9H853 241 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 MRPL16Q9NX20 251 aaKnown RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 IL36BQ9NZH7 164 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 SOX21Q9Y651 276 aaPredicted RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 TRBV7-1A0A0A6YYK4 115 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 FAM223BA6NKX1 122 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 LEPROTO15243 131 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 SLC25A5P05141 298 aaKnown RBP1.56□□□□□ -2.16
MCF2-204ENST00000414978 GNG4P50150 75 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TPPP2P59282 170 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 LINC00322Q6ZN03 302 aaPredicted RBP1.56□□□□□ -2.16
MCF2-204ENST00000414978 C2orf91Q6ZV80 131 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 FAM223AQ8IWN6 122 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TCEAL7Q9BRU2 100 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 DERL1Q9BUN8 251 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
MCF2-204ENST00000414978 TRAV9-1A0A075B6T8 112 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 GGTLC3B5MD39 225 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 H3BRN7 92 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 SLC17A3O00476 420 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 NPPCP23582 126 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 RPL35P42766 123 aaKnown RBP1.56□□□□□ -2.16
MCF2-204ENST00000414978 KRTAP25-1Q3LHN0 102 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 SBSPONQ8IVN8 264 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 ZFAND2AQ8N6M9 145 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 Q8NDZ9 215 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TMEM242Q9NWH2 141 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 RABAC1Q9UI14 185 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TRAPPC1Q9Y5R8 145 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TENM2Q9NT68 2774 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 C9JCJ5 164 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 H3BUA1 57 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 M0R378 163 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 CTSGP08311 255 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 MGST1P10620 155 aaKnown RBP1.56□□□□□ -2.16
MCF2-204ENST00000414978 UBE2G1P62253 170 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 BLCAPP62952 87 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 TMEM136Q6ZRR5 245 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 OR8I2Q8N0Y5 310 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 C3orf22Q8N5N4 141 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 C5orf17Q8NAS9 161 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 USMG5Q96IX5 58 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 OTORQ9NRC9 128 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 LY96Q9Y6Y9 160 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
MCF2-204ENST00000414978 IGHV3OR16-8A0A075B7F1 116 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 TSTD3H0UI37 97 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 IGLV7-43P04211 117 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 ELOBQ15370 118 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 KLK9Q2XQG4 91 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 ZFAND6Q6FIF0 208 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 C12orf57Q99622 126 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 KLK9Q9UKQ9 250 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 EPDR1Q9UM22 224 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 MUC4Q99102 2169 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 TRBV19A0A075B6N1 114 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 LECT2O14960 151 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 DDTP30046 118 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
MCF2-204ENST00000414978 LCE3CQ5T5A8 94 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 BAGE2Q86Y30 109 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 LYPD1Q8N2G4 141 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 RNF182Q8N6D2 247 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 IGHV3-73A0A0B4J1V6 119 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 C11orf86A6NJI1 115 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 C16orf90A8MZG2 172 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 TCRAP04437 139 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 CXCL1P09341 107 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 IGLC2P0DOY2 106 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 RPL28P46779 137 aaKnown RBP1.55□□□□□ -2.16
MCF2-204ENST00000414978 CKS1BP61024 79 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 PDE6HQ13956 83 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 OR4X2Q8NGF9 303 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 MYOZ3Q8TDC0 251 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 LINC00588Q9Y4M8 146 aa1.55□□□□□ -2.16
MCF2-204ENST00000414978 FAT3Q8TDW7 4589 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 TRBV24-1A0A075B6N3 115 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 NDUFA4O00483 81 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 GGCTO75223 188 aaKnown RBP1.54□□□□□ -2.16
MCF2-204ENST00000414978 P0C880 135 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 S100A4P26447 101 aaKnown RBP1.54□□□□□ -2.16
MCF2-204ENST00000414978 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
MCF2-204ENST00000414978 OSTCQ9NRP0 149 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 KIF25-AS1Q9Y6Z4 181 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 Q86TA4 180 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 Q8N9L7 120 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 SLC50A1Q9BRV3 221 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms