RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 A8MZ25 164 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 F8W1H4 67 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 J3QR89 54 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 CMYA5Q8N3K9 4069 aa9.59□□□□□ -0.87
SNHG17-202ENST00000414142 A0A096LPF7 62 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 F5H768 121 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 APOMO95445 188 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 MTURNQ8N3F0 131 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 HTN3P15516 51 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 HERVK_113P63121 156 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 RPL24P83731 157 aaKnown RBP9.58□□□□□ -0.88
SNHG17-202ENST00000414142 COX6A2Q02221 97 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 RETNQ9HD89 108 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
SNHG17-202ENST00000414142 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
SNHG17-202ENST00000414142 CFC1BP0CG36 223 aa9.57□□□□□ -0.88
SNHG17-202ENST00000414142 CFC1P0CG37 223 aa9.57□□□□□ -0.88
SNHG17-202ENST00000414142 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
SNHG17-202ENST00000414142 A4D1N5 150 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 LYRM7Q5U5X0 104 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 TRAV26-1A0A087WT03 109 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 TSPAN13O95857 204 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
SNHG17-202ENST00000414142 TEX48A0A1B0GUV7 120 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 H3BMG7 143 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
SNHG17-202ENST00000414142 IGKV3OR2-268A0A0C4DH90 116 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 TMEM262E9PQX1 116 aa9.55□□□□□ -0.88
SNHG17-202ENST00000414142 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
SNHG17-202ENST00000414142 SPATA25Q9BR10 227 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 LITAFQ99732 161 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
SNHG17-202ENST00000414142 TIMM17BO60830 172 aa9.52□□□□□ -0.89
SNHG17-202ENST00000414142 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
SNHG17-202ENST00000414142 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
SNHG17-202ENST00000414142 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
SNHG17-202ENST00000414142 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
SNHG17-202ENST00000414142 PRSS2P07478 247 aa9.51□□□□□ -0.89
SNHG17-202ENST00000414142 WFDC2Q14508 124 aa9.51□□□□□ -0.89
SNHG17-202ENST00000414142 NDUFA1O15239 70 aa9.5□□□□□ -0.89
SNHG17-202ENST00000414142 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
SNHG17-202ENST00000414142 MIAQ16674 131 aa9.5□□□□□ -0.89
SNHG17-202ENST00000414142 PRO0461Q9UI25 63 aa9.5□□□□□ -0.89
SNHG17-202ENST00000414142 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
SNHG17-202ENST00000414142 A0A1B0GUV1 79 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 SMIM1B2RUZ4 78 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
SNHG17-202ENST00000414142 PSMB2P49721 201 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
SNHG17-202ENST00000414142 ADAMTSL4-AS1Q5T5F5 129 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 IFITM1P13164 125 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 CKS1BP61024 79 aa9.49□□□□□ -0.89
SNHG17-202ENST00000414142 SCGB1C2P0DMR2 95 aa9.48□□□□□ -0.89
SNHG17-202ENST00000414142 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
SNHG17-202ENST00000414142 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
SNHG17-202ENST00000414142 SFTA2Q6UW10 78 aa9.47□□□□□ -0.89
SNHG17-202ENST00000414142 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
SNHG17-202ENST00000414142 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
SNHG17-202ENST00000414142 A0A0J9YWU9 116 aa9.46□□□□□ -0.89
SNHG17-202ENST00000414142 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.89
SNHG17-202ENST00000414142 SS18Q15532 418 aa9.46□□□□□ -0.9
SNHG17-202ENST00000414142 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
SNHG17-202ENST00000414142 Q9H8V8 135 aa9.46□□□□□ -0.9
SNHG17-202ENST00000414142 TCL1BO95988 128 aa9.45□□□□□ -0.9
SNHG17-202ENST00000414142 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
SNHG17-202ENST00000414142 DEFB121Q5J5C9 76 aa9.45□□□□□ -0.9
SNHG17-202ENST00000414142 Q6ZTC4 211 aa9.45□□□□□ -0.9
SNHG17-202ENST00000414142 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 LELP1Q5T871 98 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 ANK2Q01484 3957 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 IGHV3OR16-9A0A0B4J2B5 98 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 HERV-K104P63124 156 aa9.44□□□□□ -0.9
SNHG17-202ENST00000414142 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
SNHG17-202ENST00000414142 Q1RN00 199 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
SNHG17-202ENST00000414142 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 H7C2G1 150 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 K7EIL1 84 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 XCL1P47992 114 aa9.43□□□□□ -0.9
SNHG17-202ENST00000414142 NANOS2P60321 138 aaKnown RBP9.43□□□□□ -0.9
SNHG17-202ENST00000414142 Q8N3U1 123 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms