RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 UBE2L6O14933 153 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
TTC39A-208ENST00000413473 TEX29Q8N6K0 151 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 CITED1Q99966 193 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 LOC100131303A0A0U1RQF7 123 aa10.62□□□□□ -0.71
TTC39A-208ENST00000413473 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
TTC39A-208ENST00000413473 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
TTC39A-208ENST00000413473 CRLF1O75462 422 aa10.62□□□□□ -0.71
TTC39A-208ENST00000413473 FN1P02751 2386 aaKnown RBP10.61□□□□□ -0.71
TTC39A-208ENST00000413473 SNCGO76070 127 aa10.61□□□□□ -0.71
TTC39A-208ENST00000413473 PLA2G2AP14555 144 aa10.61□□□□□ -0.71
TTC39A-208ENST00000413473 LINC01006Q8NI28 216 aa10.6□□□□□ -0.71
TTC39A-208ENST00000413473 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
TTC39A-208ENST00000413473 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
TTC39A-208ENST00000413473 COPS9Q8WXC6 57 aa10.6□□□□□ -0.71
TTC39A-208ENST00000413473 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-208ENST00000413473 HERV-K104P63124 156 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 COX7A2LO14548 114 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 SHISA2Q6UWI4 295 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
TTC39A-208ENST00000413473 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 GAGE6Q13070 117 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 C15orf53Q8NAA6 179 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 ANAPC13Q9BS18 74 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 IGLV1-51P01701 117 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 HIST2H2BCQ6DN03 193 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
TTC39A-208ENST00000413473 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
TTC39A-208ENST00000413473 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
TTC39A-208ENST00000413473 ANK3Q12955 4377 aaKnown RBP10.55□□□□□ -0.72
TTC39A-208ENST00000413473 ITPR2Q14571 2701 aa10.55□□□□□ -0.72
TTC39A-208ENST00000413473 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
TTC39A-208ENST00000413473 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
TTC39A-208ENST00000413473 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
TTC39A-208ENST00000413473 FHL2Q14192 279 aa10.54□□□□□ -0.72
TTC39A-208ENST00000413473 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
TTC39A-208ENST00000413473 C16orf95Q9H693 158 aa10.53□□□□□ -0.72
TTC39A-208ENST00000413473 TRBV6-8A0A0A6YYG3 113 aa10.53□□□□□ -0.72
TTC39A-208ENST00000413473 RNASE1P07998 156 aaKnown RBP10.53□□□□□ -0.72
TTC39A-208ENST00000413473 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
TTC39A-208ENST00000413473 KRTAP1-1Q07627 177 aa10.52□□□□□ -0.72
TTC39A-208ENST00000413473 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.72
TTC39A-208ENST00000413473 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.72
TTC39A-208ENST00000413473 TENM4Q6N022 2769 aa10.52□□□□□ -0.73
TTC39A-208ENST00000413473 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
TTC39A-208ENST00000413473 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
TTC39A-208ENST00000413473 GCN1Q92616 2671 aaKnown RBP10.51□□□□□ -0.73
TTC39A-208ENST00000413473 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
TTC39A-208ENST00000413473 PDZD2O15018 2839 aa10.51□□□□□ -0.73
TTC39A-208ENST00000413473 Q6Q795 121 aa10.5□□□□□ -0.73
TTC39A-208ENST00000413473 FAM218AQ96MZ4 157 aa10.5□□□□□ -0.73
TTC39A-208ENST00000413473 NBEAL2Q6ZNJ1 2754 aa10.5□□□□□ -0.73
TTC39A-208ENST00000413473 IGHV3OR16-9A0A0B4J2B5 98 aa10.5□□□□□ -0.73
TTC39A-208ENST00000413473 TRACP01848 142 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 PPDPFQ9H3Y8 114 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 LINC00158P58513 81 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
TTC39A-208ENST00000413473 IGKV2-28A0A075B6P5 120 aa10.48□□□□□ -0.73
TTC39A-208ENST00000413473 IGKV2D-28P01615 120 aa10.48□□□□□ -0.73
TTC39A-208ENST00000413473 MRPL23Q16540 153 aaKnown RBP10.48□□□□□ -0.73
TTC39A-208ENST00000413473 HIVEP2P31629 2446 aa10.48□□□□□ -0.73
TTC39A-208ENST00000413473 CRPP02741 224 aa10.48□□□□□ -0.73
TTC39A-208ENST00000413473 PF4P02776 101 aa10.48□□□□□ -0.73
TTC39A-208ENST00000413473 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
TTC39A-208ENST00000413473 A0A087WZ39 114 aa10.46□□□□□ -0.73
TTC39A-208ENST00000413473 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.74
TTC39A-208ENST00000413473 PFN2P35080 140 aa10.45□□□□□ -0.74
TTC39A-208ENST00000413473 CCL18P55774 89 aa10.45□□□□□ -0.74
TTC39A-208ENST00000413473 Q9HAA7 133 aa10.45□□□□□ -0.74
TTC39A-208ENST00000413473 C22orf24Q9Y442 160 aa10.45□□□□□ -0.74
TTC39A-208ENST00000413473 LINC00959A0A1B0GUT2 108 aa10.44□□□□□ -0.74
TTC39A-208ENST00000413473 IBA57-AS1B1ANH7 110 aa10.43□□□□□ -0.74
TTC39A-208ENST00000413473 ACYP1P07311 99 aa10.43□□□□□ -0.74
TTC39A-208ENST00000413473 GYPEP15421 78 aa10.43□□□□□ -0.74
TTC39A-208ENST00000413473 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
TTC39A-208ENST00000413473 HILS1P60008 231 aa10.42□□□□□ -0.74
TTC39A-208ENST00000413473 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
TTC39A-208ENST00000413473 HELZ2Q9BYK8 2649 aaKnown RBP10.42□□□□□ -0.74
TTC39A-208ENST00000413473 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
TTC39A-208ENST00000413473 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
TTC39A-208ENST00000413473 B5MCH6 92 aa10.42□□□□□ -0.74
TTC39A-208ENST00000413473 XCL1P47992 114 aa10.41□□□□□ -0.74
TTC39A-208ENST00000413473 MALP21145 153 aa10.41□□□□□ -0.74
TTC39A-208ENST00000413473 UNC79Q9P2D8 2635 aa10.4□□□□□ -0.74
TTC39A-208ENST00000413473 CCDC179H3BU77 68 aa10.4□□□□□ -0.74
TTC39A-208ENST00000413473 PAX4O43316 350 aa10.4□□□□□ -0.74
TTC39A-208ENST00000413473 A0A087WYN8 130 aa10.4□□□□□ -0.75
TTC39A-208ENST00000413473 A0A096LPF7 62 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms