RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FXYD2P54710 66 aa11.95□□□□□ -0.5
PTPRC-206ENST00000413409 DGAT2L7PQ6IED9 249 aa11.95□□□□□ -0.5
PTPRC-206ENST00000413409 TIRAPP58753 221 aa11.94□□□□□ -0.5
PTPRC-206ENST00000413409 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
PTPRC-206ENST00000413409 Q6ZVH6 145 aa11.94□□□□□ -0.5
PTPRC-206ENST00000413409 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
PTPRC-206ENST00000413409 HIST1H4GQ99525 98 aa11.94□□□□□ -0.5
PTPRC-206ENST00000413409 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
PTPRC-206ENST00000413409 MIFP14174 115 aa11.93□□□□□ -0.5
PTPRC-206ENST00000413409 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
PTPRC-206ENST00000413409 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
PTPRC-206ENST00000413409 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
PTPRC-206ENST00000413409 LOC100131303A0A0U1RQF7 123 aa11.92□□□□□ -0.5
PTPRC-206ENST00000413409 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
PTPRC-206ENST00000413409 RNASE13Q5GAN3 156 aaKnown RBP11.92□□□□□ -0.5
PTPRC-206ENST00000413409 A0A0J9YY99 117 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 UBE2L6O14933 153 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 DEFB130BP0DP73 79 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 DEFB130AP0DP74 79 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
PTPRC-206ENST00000413409 IGHV4-28A0A0C4DH34 117 aa11.9□□□□□ -0.5
PTPRC-206ENST00000413409 IGHV1-58A0A0C4DH39 117 aa11.9□□□□□ -0.5
PTPRC-206ENST00000413409 FAM222AQ5U5X8 452 aa11.9□□□□□ -0.5
PTPRC-206ENST00000413409 RNF183Q96D59 192 aa11.9□□□□□ -0.5
PTPRC-206ENST00000413409 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
PTPRC-206ENST00000413409 GEMIN7Q9H840 131 aaKnown RBP11.9□□□□□ -0.5
PTPRC-206ENST00000413409 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
PTPRC-206ENST00000413409 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 A0A1B0GWB2 263 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 HERVK_113P63121 156 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 UBE2V1Q13404 147 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 Q8NAQ8 132 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
PTPRC-206ENST00000413409 TRBV6-8A0A0A6YYG3 113 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 TMEM238LA0A1B0GVL6 79 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 A6NJY4 79 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 VAMP3Q15836 100 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 AMMECR1LQ6DCA0 310 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
PTPRC-206ENST00000413409 K7EP13 123 aa11.87□□□□□ -0.51
PTPRC-206ENST00000413409 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
PTPRC-206ENST00000413409 NHP2Q9NX24 153 aaKnown RBP11.87□□□□□ -0.51
PTPRC-206ENST00000413409 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
PTPRC-206ENST00000413409 GYPEP15421 78 aa11.86□□□□□ -0.51
PTPRC-206ENST00000413409 LINC00242Q5T6M2 205 aa11.86□□□□□ -0.51
PTPRC-206ENST00000413409 DAD1P61803 113 aa11.85□□□□□ -0.51
PTPRC-206ENST00000413409 SRSF9Q13242 221 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPRC-206ENST00000413409 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
PTPRC-206ENST00000413409 IGHV3-64A0A075B6Q5 118 aa11.84□□□□□ -0.51
PTPRC-206ENST00000413409 IGLV5-39A0A0G2JS06 123 aa11.84□□□□□ -0.51
PTPRC-206ENST00000413409 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
PTPRC-206ENST00000413409 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
PTPRC-206ENST00000413409 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
PTPRC-206ENST00000413409 TRAV8-3A0A0A6YYJ7 113 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 H3BUT2 72 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 K7ERJ3 54 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 CCL25O15444 150 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 PAX4O43316 350 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 ATP5G1P05496 136 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
PTPRC-206ENST00000413409 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 A0A0J9YXY3 114 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 GAGE6Q13070 117 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
PTPRC-206ENST00000413409 GTF2H5Q6ZYL4 71 aa11.81□□□□□ -0.52
PTPRC-206ENST00000413409 CELA1Q9UNI1 258 aa11.81□□□□□ -0.52
PTPRC-206ENST00000413409 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
PTPRC-206ENST00000413409 K7EP34 96 aa11.8□□□□□ -0.52
PTPRC-206ENST00000413409 NDUFA1O15239 70 aa11.8□□□□□ -0.52
PTPRC-206ENST00000413409 TIMM17BO60830 172 aa11.8□□□□□ -0.52
PTPRC-206ENST00000413409 COX6A2Q02221 97 aa11.8□□□□□ -0.52
PTPRC-206ENST00000413409 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
PTPRC-206ENST00000413409 DEFB4AO15263 64 aa11.79□□□□□ -0.52
PTPRC-206ENST00000413409 FABP2P12104 132 aa11.79□□□□□ -0.52
PTPRC-206ENST00000413409 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
PTPRC-206ENST00000413409 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
PTPRC-206ENST00000413409 IGLL5B9A064 214 aa11.78□□□□□ -0.52
PTPRC-206ENST00000413409 F5H768 121 aa11.78□□□□□ -0.52
PTPRC-206ENST00000413409 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
PTPRC-206ENST00000413409 GAGE10A6NGK3 116 aa11.77□□□□□ -0.53
PTPRC-206ENST00000413409 SH2D6Q7Z4S9 175 aa11.77□□□□□ -0.53
PTPRC-206ENST00000413409 LITAFQ99732 161 aa11.77□□□□□ -0.53
PTPRC-206ENST00000413409 APOBP04114 4563 aaKnown RBP11.76□□□□□ -0.53
PTPRC-206ENST00000413409 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
PTPRC-206ENST00000413409 LRP1BQ9NZR2 4599 aa11.76□□□□□ -0.53
PTPRC-206ENST00000413409 RPL24P83731 157 aaKnown RBP11.75□□□□□ -0.53
PTPRC-206ENST00000413409 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
PTPRC-206ENST00000413409 C11orf68Q9H3H3 251 aaKnown RBP11.75□□□□□ -0.53
PTPRC-206ENST00000413409 SPCS1Q9Y6A9 102 aa11.75□□□□□ -0.53
PTPRC-206ENST00000413409 RTL8CO15255 209 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms