RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 IBA57-AS1B1ANH7 110 aa12.43□□□□□ -0.42
SDCBP-202ENST00000413219 C9orf153Q5TBE3 101 aa12.43□□□□□ -0.42
SDCBP-202ENST00000413219 C16orf74Q96GX8 76 aa12.42□□□□□ -0.42
SDCBP-202ENST00000413219 OBSCN-AS1Q96MR7 158 aa12.42□□□□□ -0.42
SDCBP-202ENST00000413219 CELSR2Q9HCU4 2923 aa12.42□□□□□ -0.42
SDCBP-202ENST00000413219 CCL18P55774 89 aa12.42□□□□□ -0.42
SDCBP-202ENST00000413219 LINC00158P58513 81 aa12.42□□□□□ -0.42
SDCBP-202ENST00000413219 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
SDCBP-202ENST00000413219 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
SDCBP-202ENST00000413219 A0A087WYN8 130 aa12.41□□□□□ -0.42
SDCBP-202ENST00000413219 IGHV3OR16-9A0A0B4J2B5 98 aa12.41□□□□□ -0.42
SDCBP-202ENST00000413219 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
SDCBP-202ENST00000413219 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
SDCBP-202ENST00000413219 CHD8Q9HCK8 2581 aa12.4□□□□□ -0.42
SDCBP-202ENST00000413219 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
SDCBP-202ENST00000413219 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
SDCBP-202ENST00000413219 A0A087WZ39 114 aa12.39□□□□□ -0.43
SDCBP-202ENST00000413219 COX7CP15954 63 aa12.39□□□□□ -0.43
SDCBP-202ENST00000413219 ATOX1O00244 68 aa12.38□□□□□ -0.43
SDCBP-202ENST00000413219 LRRC75A-AS1Q8N1F1 130 aa12.38□□□□□ -0.43
SDCBP-202ENST00000413219 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
SDCBP-202ENST00000413219 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
SDCBP-202ENST00000413219 C3orf56Q8N813 242 aa12.38□□□□□ -0.43
SDCBP-202ENST00000413219 KLK5Q9Y337 293 aaPredicted RBP12.38□□□□□ -0.43
SDCBP-202ENST00000413219 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
SDCBP-202ENST00000413219 TRBV6-8A0A0A6YYG3 113 aa12.37□□□□□ -0.43
SDCBP-202ENST00000413219 Q6JHZ5 121 aa12.37□□□□□ -0.43
SDCBP-202ENST00000413219 MAP1AP78559 2803 aaPredicted RBP12.37□□□□□ -0.43
SDCBP-202ENST00000413219 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
SDCBP-202ENST00000413219 CCL24O00175 119 aa12.36□□□□□ -0.43
SDCBP-202ENST00000413219 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
SDCBP-202ENST00000413219 CR1P17927 2039 aa12.35□□□□□ -0.43
SDCBP-202ENST00000413219 LY6G6DO95868 133 aa12.35□□□□□ -0.43
SDCBP-202ENST00000413219 C2orf48Q96LS8 159 aa12.35□□□□□ -0.43
SDCBP-202ENST00000413219 C14orf132Q9NPU4 83 aa12.35□□□□□ -0.43
SDCBP-202ENST00000413219 LECT2O14960 151 aa12.34□□□□□ -0.43
SDCBP-202ENST00000413219 CRYGAP11844 174 aa12.34□□□□□ -0.43
SDCBP-202ENST00000413219 IGKV3OR2-268A0A0C4DH90 116 aa12.33□□□□□ -0.44
SDCBP-202ENST00000413219 C9orf129Q5T035 196 aaKnown RBP12.33□□□□□ -0.44
SDCBP-202ENST00000413219 PAX4O43316 350 aa12.33□□□□□ -0.44
SDCBP-202ENST00000413219 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
SDCBP-202ENST00000413219 FHL2Q14192 279 aa12.32□□□□□ -0.44
SDCBP-202ENST00000413219 USP9YO00507 2555 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-202ENST00000413219 PFN2P35080 140 aa12.31□□□□□ -0.44
SDCBP-202ENST00000413219 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
SDCBP-202ENST00000413219 LINC00846Q9NV44 126 aa12.31□□□□□ -0.44
SDCBP-202ENST00000413219 USP9XQ93008 2570 aaPredicted RBP12.31□□□□□ -0.44
SDCBP-202ENST00000413219 MXRA5Q9NR99 2828 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 ANKRD17O75179 2603 aaKnown RBP12.3□□□□□ -0.44
SDCBP-202ENST00000413219 A0A1B0GX51 115 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 ORMDL1Q9P0S3 153 aa12.3□□□□□ -0.44
SDCBP-202ENST00000413219 PKD1L2Q7Z442 2459 aa12.29□□□□□ -0.44
SDCBP-202ENST00000413219 CFAP46Q8IYW2 2715 aa12.29□□□□□ -0.44
SDCBP-202ENST00000413219 C6orf226Q5I0X4 101 aa12.29□□□□□ -0.44
SDCBP-202ENST00000413219 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
SDCBP-202ENST00000413219 LINC01561Q8N1V8 128 aa12.28□□□□□ -0.44
SDCBP-202ENST00000413219 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
SDCBP-202ENST00000413219 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
SDCBP-202ENST00000413219 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
SDCBP-202ENST00000413219 NCR3O14931 201 aa12.27□□□□□ -0.45
SDCBP-202ENST00000413219 Q8IZM0 81 aa12.27□□□□□ -0.45
SDCBP-202ENST00000413219 FLNCQ14315 2725 aa12.26□□□□□ -0.45
SDCBP-202ENST00000413219 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
SDCBP-202ENST00000413219 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
SDCBP-202ENST00000413219 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
SDCBP-202ENST00000413219 CCKP06307 115 aa12.26□□□□□ -0.45
SDCBP-202ENST00000413219 IGLV1-51P01701 117 aa12.25□□□□□ -0.45
SDCBP-202ENST00000413219 SS18Q15532 418 aa12.25□□□□□ -0.45
SDCBP-202ENST00000413219 A0A1B0GUV1 79 aa12.24□□□□□ -0.45
SDCBP-202ENST00000413219 JMJD7-PLA2G4BH0Y9G9 81 aa12.24□□□□□ -0.45
SDCBP-202ENST00000413219 SLPIP03973 132 aa12.24□□□□□ -0.45
SDCBP-202ENST00000413219 SERP2Q8N6R1 65 aa12.24□□□□□ -0.45
SDCBP-202ENST00000413219 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
SDCBP-202ENST00000413219 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
SDCBP-202ENST00000413219 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
SDCBP-202ENST00000413219 J3KT08 172 aa12.23□□□□□ -0.45
SDCBP-202ENST00000413219 NDUFC2O95298 119 aa12.22□□□□□ -0.45
SDCBP-202ENST00000413219 RPS28P62857 69 aaKnown RBP12.22□□□□□ -0.45
SDCBP-202ENST00000413219 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
SDCBP-202ENST00000413219 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.45
SDCBP-202ENST00000413219 FBN2P35556 2912 aa12.21□□□□□ -0.45
SDCBP-202ENST00000413219 PLA2G2AP14555 144 aa12.21□□□□□ -0.45
SDCBP-202ENST00000413219 hADV29S1A0JD25 119 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 XCL1P47992 114 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 ATP5EP2Q5VTU8 51 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 LINC00612Q8N6U2 182 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
SDCBP-202ENST00000413219 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 NANOS2P60321 138 aaKnown RBP12.2□□□□□ -0.46
SDCBP-202ENST00000413219 Q8N814 137 aa12.2□□□□□ -0.46
SDCBP-202ENST00000413219 COX17Q14061 63 aa12.19□□□□□ -0.46
SDCBP-202ENST00000413219 KRTAP1-3Q8IUG1 177 aa12.19□□□□□ -0.46
SDCBP-202ENST00000413219 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
SDCBP-202ENST00000413219 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
SDCBP-202ENST00000413219 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms