RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.03
HLA-DQB2-229ENST00000411527 NDUFA1O15239 70 aa8.59□□□□□ -1.03
HLA-DQB2-229ENST00000411527 RIGQ13278 110 aa8.59□□□□□ -1.03
HLA-DQB2-229ENST00000411527 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
HLA-DQB2-229ENST00000411527 F8WDY8 70 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 PPP1R2P9O14990 202 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 BLOC1S1P78537 153 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 PRR4Q16378 134 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 TMEM241Q24JQ0 296 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 C10orf25Q5T742 122 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 ALKAL2Q6UX46 152 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
HLA-DQB2-229ENST00000411527 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 UNQ6190/PRO20217Q6UXQ8 127 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
HLA-DQB2-229ENST00000411527 MUC2Q02817 5179 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 APOC3P02656 99 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 UBE2D1P51668 147 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 MRPL51Q4U2R6 128 aaKnown RBP8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 SVBPQ8N300 66 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
HLA-DQB2-229ENST00000411527 ZNF727A8MUV8 499 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 UBE2BP63146 152 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 FAM104BQ5XKR9 115 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 V9GYV3 84 aa8.55□□□□□ -1.04
HLA-DQB2-229ENST00000411527 M0QXV9 152 aa8.54□□□□□ -1.04
HLA-DQB2-229ENST00000411527 SMDT1Q9H4I9 107 aa8.54□□□□□ -1.04
HLA-DQB2-229ENST00000411527 IFITM10A6NMD0 228 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 TCAPO15273 167 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 SNAPINO95295 136 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 S100A12P80511 92 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 NAT8BQ9UHF3 227 aa8.53□□□□□ -1.04
HLA-DQB2-229ENST00000411527 TRBV24-1A0A075B6N3 115 aa8.52□□□□□ -1.05
HLA-DQB2-229ENST00000411527 CKS2P33552 79 aa8.52□□□□□ -1.05
HLA-DQB2-229ENST00000411527 RPL32P62910 135 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB2-229ENST00000411527 HBBP68871 147 aa8.52□□□□□ -1.05
HLA-DQB2-229ENST00000411527 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB2-229ENST00000411527 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
HLA-DQB2-229ENST00000411527 SRP19P09132 144 aaKnown RBP8.51□□□□□ -1.05
HLA-DQB2-229ENST00000411527 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
HLA-DQB2-229ENST00000411527 TGIF2-C20orf24A0A0A6YYL0 155 aa8.5□□□□□ -1.05
HLA-DQB2-229ENST00000411527 A0A0U1RQV1 116 aa8.5□□□□□ -1.05
HLA-DQB2-229ENST00000411527 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
HLA-DQB2-229ENST00000411527 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
HLA-DQB2-229ENST00000411527 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 NDUFC2-KCTD14E9PQ53 114 aa8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 LINC00518Q8N0U6 118 aa8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 CARHSP1Q9Y2V2 147 aaKnown RBP8.49□□□□□ -1.05
HLA-DQB2-229ENST00000411527 F8W036 122 aa8.48□□□□□ -1.05
HLA-DQB2-229ENST00000411527 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
HLA-DQB2-229ENST00000411527 KRTAP9-2Q9BYQ4 174 aa8.48□□□□□ -1.05
HLA-DQB2-229ENST00000411527 A0A1B0GW15 77 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 SMIM27A0A1W2PRY6 76 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 D6R8Y8 96 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 ZNF861PO60384 105 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 TSPAN13O95857 204 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 NPYP01303 97 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 RPL23P62829 140 aaKnown RBP8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 LINC00242Q5T6M2 205 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 SEC11CQ9BY50 192 aa8.47□□□□□ -1.05
HLA-DQB2-229ENST00000411527 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.06
HLA-DQB2-229ENST00000411527 AKR1D1P51857 326 aa8.46□□□□□ -1.06
HLA-DQB2-229ENST00000411527 RAB5BP61020 215 aa8.46□□□□□ -1.06
HLA-DQB2-229ENST00000411527 ADIRFQ15847 76 aa8.46□□□□□ -1.06
HLA-DQB2-229ENST00000411527 RAB5AP20339 215 aa8.45□□□□□ -1.06
HLA-DQB2-229ENST00000411527 S100A8P05109 93 aa8.44□□□□□ -1.06
HLA-DQB2-229ENST00000411527 C10orf91Q5T1B1 145 aa8.44□□□□□ -1.06
HLA-DQB2-229ENST00000411527 MRPL54Q6P161 138 aaKnown RBP8.44□□□□□ -1.06
HLA-DQB2-229ENST00000411527 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
HLA-DQB2-229ENST00000411527 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 CTAG1AP78358 180 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PEA15Q15121 130 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 LINC00469Q8N7U9 141 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PCP4L1A6NKN8 68 aa8.42□□□□□ -1.06
HLA-DQB2-229ENST00000411527 NUPR1O60356 82 aa8.42□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PPBPP02775 128 aa8.42□□□□□ -1.06
HLA-DQB2-229ENST00000411527 S100A6P06703 90 aa8.42□□□□□ -1.06
HLA-DQB2-229ENST00000411527 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PRSS2P07478 247 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 CKS1BP61024 79 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 LBHQ53QV2 105 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms