RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FAM222AQ5U5X8 452 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 ZFAND6Q6FIF0 208 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 RAB37Q96AX2 223 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 RNF183Q96D59 192 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 LOC100131303A0A0U1RQF7 123 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 K7EP34 96 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 TIMM17BO60830 172 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 IGHV3-30P01768 117 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 IGHV3-30-5P0DP03 117 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 IGHV4-30-4P0DP06 118 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 KRTAP24-1Q3LI83 254 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 ATP6V0E2Q8NHE4 81 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 CDKN2A-AS1Q9UH64 79 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
CXCR4-202ENST00000409817 IGHV4-28A0A0C4DH34 117 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 IGLV5-39A0A0G2JS06 123 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 A0A0J9YXY3 114 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 IGLL5B9A064 214 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 PCP4P48539 62 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 DAD1P61803 113 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
CXCR4-202ENST00000409817 EGFEM1PQ0D2K5 195 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 C10orf126Q8N4M7 172 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 C3orf56Q8N813 242 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 Q8NAQ8 132 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 IGHV3-64A0A075B6Q5 118 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 TRAV26-1A0A087WT03 109 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 TRAV8-3A0A0A6YYJ7 113 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.24□□□□□ -1.57
CXCR4-202ENST00000409817 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 K7ERJ3 54 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 PRYO14603 147 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 NDUFA1O15239 70 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 ATP5G1P05496 136 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SPINK8P0C7L1 97 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 LYRM7Q5U5X0 104 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SH2D6Q7Z4S9 175 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 LINC00476Q8WZB0 136 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 CHCHD5Q9BSY4 110 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
CXCR4-202ENST00000409817 TRAV13-1A0A0B4J241 112 aa5.23□□□□□ -1.57
CXCR4-202ENST00000409817 IFITM1P13164 125 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 FOXI1Q12951 378 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 GAGE6Q13070 117 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
CXCR4-202ENST00000409817 COPS9Q8WXC6 57 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 TEP1Q99973 2627 aaKnown RBP5.22□□□□□ -1.57
CXCR4-202ENST00000409817 A0A0B4J2C4 111 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 SMIM1B2RUZ4 78 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 HERV-K104P63124 156 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 COX6A2Q02221 97 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 LITAFQ99732 161 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 ATRQ13535 2644 aa5.22□□□□□ -1.57
CXCR4-202ENST00000409817 F5H768 121 aa5.21□□□□□ -1.58
CXCR4-202ENST00000409817 MRPL23Q16540 153 aaKnown RBP5.21□□□□□ -1.58
CXCR4-202ENST00000409817 MIAQ16674 131 aa5.21□□□□□ -1.58
CXCR4-202ENST00000409817 SFTA2Q6UW10 78 aa5.21□□□□□ -1.58
CXCR4-202ENST00000409817 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
CXCR4-202ENST00000409817 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
CXCR4-202ENST00000409817 A4D1N5 150 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 CFC1BP0CG36 223 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 CFC1P0CG37 223 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 LINC01561Q8N1V8 128 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 NAA38Q9BRA0 125 aaKnown RBP5.2□□□□□ -1.58
CXCR4-202ENST00000409817 IGLV4-60A0A075B6I1 120 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 APOMO95445 188 aa5.2□□□□□ -1.58
CXCR4-202ENST00000409817 TRBV20-1A0A075B6N2 111 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 A0A087WZ39 114 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 IGHV3OR16-9A0A0B4J2B5 98 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 H3BNG1 76 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 TSPAN13O95857 204 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 KRTAP10-11P60412 298 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 RBX1P62877 108 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 SS18Q15532 418 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 ZNF625Q96I27 306 aaPredicted RBP5.19□□□□□ -1.58
CXCR4-202ENST00000409817 C11orf68Q9H3H3 251 aaKnown RBP5.19□□□□□ -1.58
CXCR4-202ENST00000409817 Q9H8V8 135 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 CELA1Q9UNI1 258 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 ICOSQ9Y6W8 199 aa5.19□□□□□ -1.58
CXCR4-202ENST00000409817 FLNBO75369 2602 aaKnown RBP5.19□□□□□ -1.58
CXCR4-202ENST00000409817 LINC00959A0A1B0GUT2 108 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 TMEM262E9PQX1 116 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 F8W1H4 67 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 DEFB4AO15263 64 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 PRSS2P07478 247 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 PRIMA1Q86XR5 153 aa5.18□□□□□ -1.58
CXCR4-202ENST00000409817 NIPBLQ6KC79 2804 aaeCLIP5.18□□□□□ -1.58
CXCR4-202ENST00000409817 LELP1Q5T871 98 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 COX7B2Q8TF08 81 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 ERG28Q9UKR5 140 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 IGHV3-33P01772 117 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 ADAMTSL4-AS1Q5T5F5 129 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
CXCR4-202ENST00000409817 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
CXCR4-202ENST00000409817 K7ERU9 68 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms