RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SHANK2-203ENST00000409161 LOC107984640A0A0U1RRK4 108 aa9.04□□□□□ -0.96
SHANK2-203ENST00000409161 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
SHANK2-203ENST00000409161 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 WFDC13Q8IUB5 93 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
SHANK2-203ENST00000409161 EBI3Q14213 229 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 LY6LH3BQJ8 138 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 TSHBP01222 138 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
SHANK2-203ENST00000409161 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 Q6ZVQ6 151 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
SHANK2-203ENST00000409161 LELP1Q5T871 98 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 XAGE1AQ9HD64 81 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 RPL28P46779 137 aaKnown RBP9□□□□□ -0.97
SHANK2-203ENST00000409161 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 IGKV2D-28P01615 120 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 F8WDY8 70 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 Q8N814 137 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 DEFB1P60022 68 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 IGLV2-11P01706 119 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 Q8N976 141 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 A0A096LNI7 61 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 C22orf34Q6ZV56 151 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 CRIP1P50238 77 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 ADORA2A-AS1P86434 159 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 TRAV10A0A0B4J240 114 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 KLLNB2CW77 178 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 COL4A3Q01955 1670 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 Q6YL49 198 aa8.97□□□□□ -0.97
SHANK2-203ENST00000409161 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
SHANK2-203ENST00000409161 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.97
SHANK2-203ENST00000409161 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
SHANK2-203ENST00000409161 ESRGQ1W209 222 aa8.96□□□□□ -0.98
SHANK2-203ENST00000409161 CXCL6P80162 114 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 IGF2RP11717 2491 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 MUC22E2RYF6 1773 aaPredicted RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 PRR4Q16378 134 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 CSDC2Q9Y534 153 aaKnown RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 ANKRD11Q6UB99 2663 aaPredicted RBP8.94□□□□□ -0.98
SHANK2-203ENST00000409161 PRORYQ9H606 182 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 C1orf137Q5JT78 98 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
SHANK2-203ENST00000409161 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 TRBV7-7A0A0K0K1E9 115 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
SHANK2-203ENST00000409161 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 Q8N3U1 123 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 KPRPQ5T749 579 aaPredicted RBP8.91□□□□□ -0.98
SHANK2-203ENST00000409161 EGFEM1PQ0D2K5 195 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 A8MZ25 164 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 NRGNQ92686 78 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 LMO4P61968 165 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGHV4-30-4P0DP06 118 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGHV4-31P0DP07 118 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 NCOR2Q9Y618 2525 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 Q6ZS46 218 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 PCSK5Q92824 1860 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 PSPHP1O15172 72 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 H0Y9P7 68 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
SHANK2-203ENST00000409161 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 LOC100131303A0A0U1RQF7 123 aa8.88□□□□□ -0.99
SHANK2-203ENST00000409161 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
SHANK2-203ENST00000409161 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
SHANK2-203ENST00000409161 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 POM121L12Q8N7R1 296 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 SHISA2Q6UWI4 295 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 SPTBN4Q9H254 2564 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 RPL37AP8A6NKH3 93 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 BBC3Q96PG8 261 aaPredicted RBP8.87□□□□□ -0.99
SHANK2-203ENST00000409161 A0A1B0GW54 56 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms