RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 J3QKU1 62 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 GAGE7O76087 117 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 CMC4P56277 68 aaPredicted RBP13.08□□□□□ -0.32
EWSR1-207ENST00000406548 Q6Q795 121 aa13.08□□□□□ -0.32
EWSR1-207ENST00000406548 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
EWSR1-207ENST00000406548 PPDPFQ9H3Y8 114 aa13.07□□□□□ -0.32
EWSR1-207ENST00000406548 LOC100131303A0A0U1RQF7 123 aa13.07□□□□□ -0.32
EWSR1-207ENST00000406548 WFDC10AQ9H1F0 79 aa13.07□□□□□ -0.32
EWSR1-207ENST00000406548 ITPR3Q14573 2671 aa13.06□□□□□ -0.32
EWSR1-207ENST00000406548 SONP18583 2426 aaKnown RBP13.05□□□□□ -0.32
EWSR1-207ENST00000406548 TRBV6-4A0A1B0GX49 114 aa13.05□□□□□ -0.32
EWSR1-207ENST00000406548 WFDC11Q8NEX6 87 aa13.05□□□□□ -0.32
EWSR1-207ENST00000406548 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
EWSR1-207ENST00000406548 RPL35AP18077 110 aaKnown RBP13.04□□□□□ -0.32
EWSR1-207ENST00000406548 NDUFV3P56181 108 aaKnown RBP13.04□□□□□ -0.32
EWSR1-207ENST00000406548 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
EWSR1-207ENST00000406548 TTC32Q5I0X7 151 aa13.04□□□□□ -0.32
EWSR1-207ENST00000406548 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
EWSR1-207ENST00000406548 APCP25054 2843 aa13.03□□□□□ -0.32
EWSR1-207ENST00000406548 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
EWSR1-207ENST00000406548 OVOL2Q9BRP0 275 aa13.03□□□□□ -0.32
EWSR1-207ENST00000406548 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
EWSR1-207ENST00000406548 TRACP01848 142 aa13.02□□□□□ -0.33
EWSR1-207ENST00000406548 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
EWSR1-207ENST00000406548 C19orf73Q9NVV2 129 aa13.02□□□□□ -0.33
EWSR1-207ENST00000406548 GAGE6Q13070 117 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 CSNK1G2-AS1Q8NCQ2 148 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 SETXQ7Z333 2677 aaKnown RBP13.01□□□□□ -0.33
EWSR1-207ENST00000406548 NOTCH3Q9UM47 2321 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 TENM4Q6N022 2769 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 IGLV1-51P01701 117 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
EWSR1-207ENST00000406548 NF1P21359 2839 aa13□□□□□ -0.33
EWSR1-207ENST00000406548 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
EWSR1-207ENST00000406548 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
EWSR1-207ENST00000406548 TRAV13-2A0A0B4J235 113 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 PF4P02776 101 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 MIR7-3HGQ8N6C7 128 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 TOMM7Q9P0U1 55 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 JMJD1CQ15652 2540 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 CUBNO60494 3623 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 IGLV4-60A0A075B6I1 120 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 TRBV6-8A0A0A6YYG3 113 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 CRPP02741 224 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 C16orf95Q9H693 158 aa12.98□□□□□ -0.33
EWSR1-207ENST00000406548 FHL2Q14192 279 aa12.97□□□□□ -0.33
EWSR1-207ENST00000406548 NBPF19A0A087WUL8 3843 aa12.96□□□□□ -0.33
EWSR1-207ENST00000406548 ACYP1P07311 99 aa12.96□□□□□ -0.33
EWSR1-207ENST00000406548 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.33
EWSR1-207ENST00000406548 CHCHD5Q9BSY4 110 aa12.96□□□□□ -0.33
EWSR1-207ENST00000406548 RNASE1P07998 156 aaKnown RBP12.96□□□□□ -0.34
EWSR1-207ENST00000406548 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.34
EWSR1-207ENST00000406548 SND1-IT1Q9HBX3 110 aa12.96□□□□□ -0.34
EWSR1-207ENST00000406548 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
EWSR1-207ENST00000406548 BAALC-AS2P0C853 105 aa12.95□□□□□ -0.34
EWSR1-207ENST00000406548 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
EWSR1-207ENST00000406548 NIPBLQ6KC79 2804 aaeCLIP12.94□□□□□ -0.34
EWSR1-207ENST00000406548 IGKV2-28A0A075B6P5 120 aa12.94□□□□□ -0.34
EWSR1-207ENST00000406548 IGKV2D-28P01615 120 aa12.94□□□□□ -0.34
EWSR1-207ENST00000406548 TRBV7-7A0A0K0K1E9 115 aa12.93□□□□□ -0.34
EWSR1-207ENST00000406548 LINC00158P58513 81 aa12.93□□□□□ -0.34
EWSR1-207ENST00000406548 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
EWSR1-207ENST00000406548 A0A087WZ39 114 aa12.92□□□□□ -0.34
EWSR1-207ENST00000406548 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
EWSR1-207ENST00000406548 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
EWSR1-207ENST00000406548 SETD2Q9BYW2 2564 aaPredicted RBP12.91□□□□□ -0.34
EWSR1-207ENST00000406548 IBA57-AS1B1ANH7 110 aa12.9□□□□□ -0.34
EWSR1-207ENST00000406548 CCL18P55774 89 aa12.9□□□□□ -0.34
EWSR1-207ENST00000406548 B5MCH6 92 aa12.89□□□□□ -0.35
EWSR1-207ENST00000406548 CCDC179H3BU77 68 aa12.89□□□□□ -0.35
EWSR1-207ENST00000406548 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
EWSR1-207ENST00000406548 Q9HAA7 133 aa12.89□□□□□ -0.35
EWSR1-207ENST00000406548 SMIM11BQ8TCY0 68 aa12.88□□□□□ -0.35
EWSR1-207ENST00000406548 LINC00959A0A1B0GUT2 108 aa12.88□□□□□ -0.35
EWSR1-207ENST00000406548 DEFB130BP0DP73 79 aa12.88□□□□□ -0.35
EWSR1-207ENST00000406548 DEFB130AP0DP74 79 aa12.88□□□□□ -0.35
EWSR1-207ENST00000406548 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
EWSR1-207ENST00000406548 HELZ2Q9BYK8 2649 aaKnown RBP12.87□□□□□ -0.35
EWSR1-207ENST00000406548 INAFM2P0DMQ5 153 aa12.87□□□□□ -0.35
EWSR1-207ENST00000406548 MALP21145 153 aa12.87□□□□□ -0.35
EWSR1-207ENST00000406548 PFN2P35080 140 aa12.86□□□□□ -0.35
EWSR1-207ENST00000406548 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
EWSR1-207ENST00000406548 SS18L2Q9UHA2 77 aa12.86□□□□□ -0.35
EWSR1-207ENST00000406548 LINC00612Q8N6U2 182 aa12.85□□□□□ -0.35
EWSR1-207ENST00000406548 IMUPQ9GZP8 106 aa12.85□□□□□ -0.35
EWSR1-207ENST00000406548 A0A087WYN8 130 aa12.85□□□□□ -0.35
EWSR1-207ENST00000406548 DNAL4O96015 105 aa12.85□□□□□ -0.35
EWSR1-207ENST00000406548 LINC00643Q86TS7 51 aa12.85□□□□□ -0.35
EWSR1-207ENST00000406548 PDZD2O15018 2839 aa12.84□□□□□ -0.35
EWSR1-207ENST00000406548 ANK3Q12955 4377 aaKnown RBP12.84□□□□□ -0.35
EWSR1-207ENST00000406548 GYPEP15421 78 aa12.84□□□□□ -0.35
EWSR1-207ENST00000406548 SDIM1Q6ZPB5 146 aa12.84□□□□□ -0.35
EWSR1-207ENST00000406548 H0YGX0 51 aa12.83□□□□□ -0.36
EWSR1-207ENST00000406548 PAX4O43316 350 aa12.82□□□□□ -0.36
EWSR1-207ENST00000406548 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms