RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 C16orf74Q96GX8 76 aa10.39□□□□□ -0.75
NUCB1-201ENST00000405315 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
NUCB1-201ENST00000405315 ANAPC13Q9BS18 74 aa10.38□□□□□ -0.75
NUCB1-201ENST00000405315 HERV-K104P63124 156 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 COX7A2LO14548 114 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 APCP25054 2843 aa10.37□□□□□ -0.75
NUCB1-201ENST00000405315 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
NUCB1-201ENST00000405315 CMC4P56277 68 aaPredicted RBP10.36□□□□□ -0.75
NUCB1-201ENST00000405315 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
NUCB1-201ENST00000405315 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
NUCB1-201ENST00000405315 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
NUCB1-201ENST00000405315 DEFB121Q5J5C9 76 aa10.34□□□□□ -0.75
NUCB1-201ENST00000405315 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
NUCB1-201ENST00000405315 GAGE6Q13070 117 aa10.34□□□□□ -0.75
NUCB1-201ENST00000405315 LINC01006Q8NI28 216 aa10.34□□□□□ -0.75
NUCB1-201ENST00000405315 NF1P21359 2839 aa10.34□□□□□ -0.75
NUCB1-201ENST00000405315 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
NUCB1-201ENST00000405315 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
NUCB1-201ENST00000405315 PLA2G2AP14555 144 aa10.33□□□□□ -0.76
NUCB1-201ENST00000405315 C19orf73Q9NVV2 129 aa10.33□□□□□ -0.76
NUCB1-201ENST00000405315 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 C2CD3Q4AC94 2353 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 FAM240AA0A1B0GVK7 77 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 TOMM7Q9P0U1 55 aa10.32□□□□□ -0.76
NUCB1-201ENST00000405315 B5MCH6 92 aa10.31□□□□□ -0.76
NUCB1-201ENST00000405315 CSNK1G2-AS1Q8NCQ2 148 aa10.31□□□□□ -0.76
NUCB1-201ENST00000405315 OVOL2Q9BRP0 275 aa10.31□□□□□ -0.76
NUCB1-201ENST00000405315 FLNAP21333 2647 aaKnown RBP10.31□□□□□ -0.76
NUCB1-201ENST00000405315 Q6Q795 121 aa10.31□□□□□ -0.76
NUCB1-201ENST00000405315 IGLV4-60A0A075B6I1 120 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
NUCB1-201ENST00000405315 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 CUBNO60494 3623 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 MIR7-3HGQ8N6C7 128 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
NUCB1-201ENST00000405315 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
NUCB1-201ENST00000405315 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
NUCB1-201ENST00000405315 FHL2Q14192 279 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 MRPL23Q16540 153 aaKnown RBP10.29□□□□□ -0.76
NUCB1-201ENST00000405315 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 TRACP01848 142 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 CRPP02741 224 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 HIST2H2BCQ6DN03 193 aa10.29□□□□□ -0.76
NUCB1-201ENST00000405315 FAM218AQ96MZ4 157 aa10.28□□□□□ -0.76
NUCB1-201ENST00000405315 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
NUCB1-201ENST00000405315 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
NUCB1-201ENST00000405315 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
NUCB1-201ENST00000405315 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
NUCB1-201ENST00000405315 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
NUCB1-201ENST00000405315 SND1-IT1Q9HBX3 110 aa10.27□□□□□ -0.77
NUCB1-201ENST00000405315 LINC00158P58513 81 aa10.26□□□□□ -0.77
NUCB1-201ENST00000405315 LINC00337Q8N6G1 96 aa10.26□□□□□ -0.77
NUCB1-201ENST00000405315 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
NUCB1-201ENST00000405315 PF4P02776 101 aa10.26□□□□□ -0.77
NUCB1-201ENST00000405315 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
NUCB1-201ENST00000405315 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
NUCB1-201ENST00000405315 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
NUCB1-201ENST00000405315 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
NUCB1-201ENST00000405315 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
NUCB1-201ENST00000405315 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
NUCB1-201ENST00000405315 C5orf38Q86SI9 138 aa10.24□□□□□ -0.77
NUCB1-201ENST00000405315 NBPF19A0A087WUL8 3843 aa10.24□□□□□ -0.77
NUCB1-201ENST00000405315 A0A087WZ39 114 aa10.23□□□□□ -0.77
NUCB1-201ENST00000405315 ACYP1P07311 99 aa10.23□□□□□ -0.77
NUCB1-201ENST00000405315 Q9HAA7 133 aa10.23□□□□□ -0.77
NUCB1-201ENST00000405315 CCL18P55774 89 aa10.22□□□□□ -0.77
NUCB1-201ENST00000405315 SMIM20Q8N5G0 67 aa10.22□□□□□ -0.77
NUCB1-201ENST00000405315 PFN2P35080 140 aa10.22□□□□□ -0.77
NUCB1-201ENST00000405315 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
NUCB1-201ENST00000405315 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.77
NUCB1-201ENST00000405315 IBA57-AS1B1ANH7 110 aa10.21□□□□□ -0.77
NUCB1-201ENST00000405315 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
NUCB1-201ENST00000405315 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.78
NUCB1-201ENST00000405315 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
NUCB1-201ENST00000405315 CCDC179H3BU77 68 aa10.2□□□□□ -0.78
NUCB1-201ENST00000405315 GYPEP15421 78 aa10.2□□□□□ -0.78
NUCB1-201ENST00000405315 KIR2DL5BQ8NHK3 375 aa10.2□□□□□ -0.78
NUCB1-201ENST00000405315 ACANP16112 2415 aa10.19□□□□□ -0.78
NUCB1-201ENST00000405315 SMCR5Q8TEV8 140 aa10.19□□□□□ -0.78
NUCB1-201ENST00000405315 MALP21145 153 aa10.19□□□□□ -0.78
NUCB1-201ENST00000405315 A0A087WYN8 130 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 XCL1P47992 114 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 HILS1P60008 231 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 MTORP42345 2549 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 DNAL4O96015 105 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
NUCB1-201ENST00000405315 PAX4O43316 350 aa10.17□□□□□ -0.78
NUCB1-201ENST00000405315 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
NUCB1-201ENST00000405315 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
NUCB1-201ENST00000405315 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
NUCB1-201ENST00000405315 SS18Q15532 418 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms