RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 TRGV1A0A0A0MS02 117 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 GHRHP01286 108 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
LINC01139-201ENST00000400946 SPINK8P0C7L1 97 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
LINC01139-201ENST00000400946 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 FAM240AA0A1B0GVK7 77 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 LST1O00453 97 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 TRIAP1O43715 76 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 DEFB121Q5J5C9 76 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 TMEM243Q9BU79 118 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 CDC42SE2Q9NRR3 84 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 Q9UF83 564 aa6.25□□□□□ -1.41
LINC01139-201ENST00000400946 CSPG4Q6UVK1 2322 aa6.24□□□□□ -1.41
LINC01139-201ENST00000400946 FLNAP21333 2647 aaKnown RBP6.24□□□□□ -1.41
LINC01139-201ENST00000400946 ADARB2-AS1A8MUL3 147 aa6.24□□□□□ -1.41
LINC01139-201ENST00000400946 LY6G6DO95868 133 aa6.24□□□□□ -1.41
LINC01139-201ENST00000400946 IGLV1-51P01701 117 aa6.24□□□□□ -1.41
LINC01139-201ENST00000400946 MDFIQ99750 246 aa6.24□□□□□ -1.41
LINC01139-201ENST00000400946 ACANP16112 2415 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 A0A1W2PRX2 142 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 SMIM1B2RUZ4 78 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 NDUFA7O95182 113 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 Q6Q795 121 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
LINC01139-201ENST00000400946 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
LINC01139-201ENST00000400946 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 F5H768 121 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 H7C2G1 150 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 PRM2P04554 102 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 KRTAP1-1Q07627 177 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
LINC01139-201ENST00000400946 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 Q6ZTI0 123 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 UBE2WQ96B02 151 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 Q9H8V8 135 aa6.22□□□□□ -1.41
LINC01139-201ENST00000400946 UBE2L6O14933 153 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 TRACP01848 142 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 ACYP1P07311 99 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 COX6A2Q02221 97 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.21□□□□□ -1.42
LINC01139-201ENST00000400946 CSNK1G2-AS1Q8NCQ2 148 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 LINC01006Q8NI28 216 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
LINC01139-201ENST00000400946 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
LINC01139-201ENST00000400946 PLAC8L1A1L4L8 177 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 COX7A2LO14548 114 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 GIG44P09565 113 aaPredicted RBP6.2□□□□□ -1.42
LINC01139-201ENST00000400946 XGP55808 180 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 CKS1BP61024 79 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 PRIMA1Q86XR5 153 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 LINC01561Q8N1V8 128 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 KIR2DL5BQ8NHK3 375 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 LINC00694P0DN24 101 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
LINC01139-201ENST00000400946 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
LINC01139-201ENST00000400946 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE12JA6NER3 117 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 SMIM9A6NGZ8 99 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE4Q13068 117 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE5Q13069 117 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
LINC01139-201ENST00000400946 MTORP42345 2549 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 TRGV4A0A0C4DH28 118 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 INAFM1C9JVW0 142 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 SNCGO76070 127 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 HILS1P60008 231 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 SEC61GP60059 68 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 SORL1Q92673 2214 aa6.18□□□□□ -1.42
LINC01139-201ENST00000400946 NF1P21359 2839 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 ZANQ9Y493 2812 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 RPL28P46779 137 aaKnown RBP6.17□□□□□ -1.42
LINC01139-201ENST00000400946 FHL2Q14192 279 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 HIST2H2BDQ6DRA6 164 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
LINC01139-201ENST00000400946 SETD2Q9BYW2 2564 aaPredicted RBP6.16□□□□□ -1.42
LINC01139-201ENST00000400946 A0A087WZ39 114 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 IGHV3OR16-9A0A0B4J2B5 98 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE7O76087 117 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE12FP0CL80 117 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE12GP0CL81 117 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE12IP0CL82 117 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
LINC01139-201ENST00000400946 GAGE2EQ4V326 116 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms