RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 HBDP02042 147 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 MSMBP08118 114 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 PSMG4Q5JS54 123 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 LYPD1Q8N2G4 141 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 SCRT2Q9NQ03 307 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.7
TRAPPC13-202ENST00000399438 SNRPD3P62318 126 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-202ENST00000399438 PRR4Q16378 134 aa4.4□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGHV3-16A0A0C4DH30 117 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 IGLV5-39A0A0G2JS06 123 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 IGHV7-4-1A0A0J9YVY3 117 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 MORN3Q6PF18 240 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 LINC00588Q9Y4M8 146 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 H3BUT2 72 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 SPINK13Q1W4C9 94 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 PHLDA3Q9Y5J5 127 aa4.4□□□□□ -1.71
TRAPPC13-202ENST00000399438 IGHV3-64A0A075B6Q5 118 aa4.39□□□□□ -1.71
TRAPPC13-202ENST00000399438 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-202ENST00000399438 OTOGQ6ZRI0 2925 aa4.39□□□□□ -1.71
TRAPPC13-202ENST00000399438 ZFAND2AQ8N6M9 145 aa4.39□□□□□ -1.71
TRAPPC13-202ENST00000399438 ST20Q9HBF5 79 aa4.39□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRBV7-1A0A0A6YYK4 115 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 H3BT86 120 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 CD7P09564 240 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 DEFB113Q30KQ7 82 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 RNASE13Q5GAN3 156 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 LY6G6DO95868 133 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 CXCL5P42830 114 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 ORMDL2Q53FV1 153 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 KLK5Q9Y337 293 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 TENM1Q9UKZ4 2725 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 FXYD2P54710 66 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 DSCR9P59020 149 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 C9orf66Q5T8R8 295 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 SLC50A1Q9BRV3 221 aa4.38□□□□□ -1.71
TRAPPC13-202ENST00000399438 A6NDX4 124 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 COX8AP10176 69 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 PROK1P58294 105 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 KRTAP1-3Q8IUG1 177 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 Q8N2B8 174 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 A0A087WW49 117 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 HERVK_113P61574 105 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 C3orf56Q8N813 242 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 NRACQ8N912 160 aa4.37□□□□□ -1.71
TRAPPC13-202ENST00000399438 KLHL30-AS1Q8NEE0 82 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 NHP2Q9NX24 153 aaKnown RBP4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 U3KQK5 164 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 ASIPP42127 132 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 UBE2BP63146 152 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 SCXQ7RTU7 201 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 ATP6V0E2Q8NHE4 81 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 A0A096LNT2 108 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 B4DSR2 109 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRACP01848 142 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 SLC25A16P16260 332 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 CASC10Q5T4H9 136 aa4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 FP248Q71RG6 208 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-202ENST00000399438 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 ZNF56Q15929 161 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 SCGB3A1Q96QR1 104 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 NDUFA4O00483 81 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 SOCS3O14543 225 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 IGKCP01834 107 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRAV21A0A0B4J279 112 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 FAM223BA6NKX1 122 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 FAM223AQ8IWN6 122 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 MYOZ3Q8TDC0 251 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 PDZD2O15018 2839 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 IGLV2-18A0A075B6J9 118 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 SMIM2Q9BVW6 85 aa4.34□□□□□ -1.71
TRAPPC13-202ENST00000399438 TRBV25-1A0A075B6N4 114 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 RBAKDNA6NC62 111 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 F8W1H4 67 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 DEFB131AP59861 70 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 Q8N8P6 123 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 CHAC1Q9BUX1 264 aa4.34□□□□□ -1.72
TRAPPC13-202ENST00000399438 IGLV4-3A0A075B6K6 122 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 SLC25A29Q8N8R3 303 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 NXT2Q9NPJ8 142 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 HIVEP1P15822 2718 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 H7C2G1 150 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms