RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 DYNC1H1Q14204 4646 aaKnown RBP11.71□□□□□ -0.53
SMIM11A-202ENST00000399295 Q6ZUT4 128 aa11.71□□□□□ -0.53
SMIM11A-202ENST00000399295 ATOH7Q8N100 152 aa11.71□□□□□ -0.53
SMIM11A-202ENST00000399295 FAM104AQ969W3 186 aa11.71□□□□□ -0.53
SMIM11A-202ENST00000399295 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
SMIM11A-202ENST00000399295 EREGO14944 169 aa11.7□□□□□ -0.54
SMIM11A-202ENST00000399295 PSCAO43653 123 aa11.69□□□□□ -0.54
SMIM11A-202ENST00000399295 KLK12Q9UKR0 248 aa11.69□□□□□ -0.54
SMIM11A-202ENST00000399295 IGLC3P0DOY3 106 aa11.68□□□□□ -0.54
SMIM11A-202ENST00000399295 SEC11AP67812 179 aa11.68□□□□□ -0.54
SMIM11A-202ENST00000399295 PAM16Q9Y3D7 125 aa11.68□□□□□ -0.54
SMIM11A-202ENST00000399295 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 A0A087WTM6 91 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 RBX1P62877 108 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 SPATA45Q537H7 98 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 MPV17L2Q567V2 206 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 ZC2HC1BQ5TFG8 222 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
SMIM11A-202ENST00000399295 UBE2D1P51668 147 aa11.66□□□□□ -0.54
SMIM11A-202ENST00000399295 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
SMIM11A-202ENST00000399295 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
SMIM11A-202ENST00000399295 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
SMIM11A-202ENST00000399295 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 TSTD3H0UI37 97 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
SMIM11A-202ENST00000399295 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
SMIM11A-202ENST00000399295 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
SMIM11A-202ENST00000399295 CCL25O15444 150 aa11.64□□□□□ -0.55
SMIM11A-202ENST00000399295 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
SMIM11A-202ENST00000399295 RMI2Q96E14 147 aa11.64□□□□□ -0.55
SMIM11A-202ENST00000399295 A0A0J9YXV3 536 aa11.63□□□□□ -0.55
SMIM11A-202ENST00000399295 HERVK_113P61574 105 aa11.63□□□□□ -0.55
SMIM11A-202ENST00000399295 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
SMIM11A-202ENST00000399295 GEMIN7Q9H840 131 aaKnown RBP11.63□□□□□ -0.55
SMIM11A-202ENST00000399295 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
SMIM11A-202ENST00000399295 CRPP02741 224 aa11.62□□□□□ -0.55
SMIM11A-202ENST00000399295 HERVK_113P63121 156 aa11.62□□□□□ -0.55
SMIM11A-202ENST00000399295 STPG4Q8N801 248 aa11.62□□□□□ -0.55
SMIM11A-202ENST00000399295 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 LRCOL1A6NCL2 159 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 TMEM170BQ5T4T1 132 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
SMIM11A-202ENST00000399295 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
SMIM11A-202ENST00000399295 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 H3BRM9 83 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 ZNF22P17026 224 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 SS18Q15532 418 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 ANKRD39Q53RE8 183 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
SMIM11A-202ENST00000399295 DNAH5Q8TE73 4624 aa11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 E9PLD3 99 aa11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 FUSP35637 526 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 PRR34Q9NV39 138 aa11.58□□□□□ -0.56
SMIM11A-202ENST00000399295 KIAA1109Q2LD37 5005 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 TMEM223A0PJW6 202 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 MIAQ16674 131 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 LINC00469Q8N7U9 141 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
SMIM11A-202ENST00000399295 COX8AP10176 69 aa11.56□□□□□ -0.56
SMIM11A-202ENST00000399295 REG3AQ06141 175 aa11.56□□□□□ -0.56
SMIM11A-202ENST00000399295 Q8N814 137 aa11.56□□□□□ -0.56
SMIM11A-202ENST00000399295 MIEN1Q9BRT3 115 aa11.56□□□□□ -0.56
SMIM11A-202ENST00000399295 HERC2O95714 4834 aa11.55□□□□□ -0.56
SMIM11A-202ENST00000399295 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
SMIM11A-202ENST00000399295 LECT2O14960 151 aa11.55□□□□□ -0.56
SMIM11A-202ENST00000399295 NMUP48645 174 aa11.55□□□□□ -0.56
SMIM11A-202ENST00000399295 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SMIM11A-202ENST00000399295 DLEU1O43261 78 aa11.54□□□□□ -0.56
SMIM11A-202ENST00000399295 SLC25A34Q6PIV7 304 aa11.54□□□□□ -0.56
SMIM11A-202ENST00000399295 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
SMIM11A-202ENST00000399295 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
SMIM11A-202ENST00000399295 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
SMIM11A-202ENST00000399295 PCLOQ9Y6V0 5065 aa11.53□□□□□ -0.56
SMIM11A-202ENST00000399295 TRAV8-4A0A0B4J246 113 aa11.53□□□□□ -0.56
SMIM11A-202ENST00000399295 LEPROTO15243 131 aa11.53□□□□□ -0.56
SMIM11A-202ENST00000399295 COX6A2Q02221 97 aa11.53□□□□□ -0.56
SMIM11A-202ENST00000399295 PLEKHB2Q96CS7 222 aa11.53□□□□□ -0.56
SMIM11A-202ENST00000399295 IGKV2D-26A0A0A0MRZ7 120 aa11.52□□□□□ -0.57
SMIM11A-202ENST00000399295 IGLV5-52A0A0A0MRZ9 124 aa11.52□□□□□ -0.57
SMIM11A-202ENST00000399295 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
SMIM11A-202ENST00000399295 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
SMIM11A-202ENST00000399295 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
SMIM11A-202ENST00000399295 PCP4L1A6NKN8 68 aa11.51□□□□□ -0.57
SMIM11A-202ENST00000399295 DDTP30046 118 aa11.51□□□□□ -0.57
SMIM11A-202ENST00000399295 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
SMIM11A-202ENST00000399295 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms