RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 IGHV1-58A0A0C4DH39 117 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 H3BNG1 76 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 H3BUT2 72 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 TMEM243Q9BU79 118 aa10.33□□□□□ -0.76
CAPN3-207ENST00000397200 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 A0A1W2PPM0 123 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 IGLL5B9A064 214 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 K7ERJ3 54 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 RAB37Q96AX2 223 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
CAPN3-207ENST00000397200 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CAPN3-207ENST00000397200 CDC42SE2Q9NRR3 84 aa10.31□□□□□ -0.76
CAPN3-207ENST00000397200 KLK5Q9Y337 293 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-207ENST00000397200 TMEM238LA0A1B0GVL6 79 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 A6NJY4 79 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
CAPN3-207ENST00000397200 K7EP34 96 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 HERVK_113P63121 156 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
CAPN3-207ENST00000397200 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 A0A096LPF7 62 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 SH2D6Q7Z4S9 175 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
CAPN3-207ENST00000397200 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
CAPN3-207ENST00000397200 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
CAPN3-207ENST00000397200 UBE2L6O14933 153 aa10.28□□□□□ -0.76
CAPN3-207ENST00000397200 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAPN3-207ENST00000397200 GTF2H5Q6ZYL4 71 aa10.28□□□□□ -0.76
CAPN3-207ENST00000397200 ATP6V0E2Q8NHE4 81 aa10.28□□□□□ -0.76
CAPN3-207ENST00000397200 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
CAPN3-207ENST00000397200 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 TMEM238C9JI98 176 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 COX6A2Q02221 97 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 LITAFQ99732 161 aa10.26□□□□□ -0.77
CAPN3-207ENST00000397200 FABP2P12104 132 aa10.25□□□□□ -0.77
CAPN3-207ENST00000397200 CSMD3Q7Z407 3707 aa10.25□□□□□ -0.77
CAPN3-207ENST00000397200 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
CAPN3-207ENST00000397200 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
CAPN3-207ENST00000397200 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
CAPN3-207ENST00000397200 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
CAPN3-207ENST00000397200 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
CAPN3-207ENST00000397200 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
CAPN3-207ENST00000397200 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
CAPN3-207ENST00000397200 NDUFA1O15239 70 aa10.23□□□□□ -0.77
CAPN3-207ENST00000397200 TIMM17BO60830 172 aa10.23□□□□□ -0.77
CAPN3-207ENST00000397200 STARD9Q9P2P6 4700 aa10.22□□□□□ -0.77
CAPN3-207ENST00000397200 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
CAPN3-207ENST00000397200 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
CAPN3-207ENST00000397200 GAGE6Q13070 117 aa10.22□□□□□ -0.77
CAPN3-207ENST00000397200 LYPD5Q6UWN5 251 aa10.22□□□□□ -0.77
CAPN3-207ENST00000397200 CASC10Q5T4H9 136 aa10.21□□□□□ -0.78
CAPN3-207ENST00000397200 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
CAPN3-207ENST00000397200 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
CAPN3-207ENST00000397200 CFC1P0CG37 223 aa10.2□□□□□ -0.78
CAPN3-207ENST00000397200 ESRGQ1W209 222 aa10.2□□□□□ -0.78
CAPN3-207ENST00000397200 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
CAPN3-207ENST00000397200 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
CAPN3-207ENST00000397200 A0A1B0GUV1 79 aa10.19□□□□□ -0.78
CAPN3-207ENST00000397200 CCL18P55774 89 aa10.19□□□□□ -0.78
CAPN3-207ENST00000397200 RPL24P83731 157 aaKnown RBP10.19□□□□□ -0.78
CAPN3-207ENST00000397200 MIAQ16674 131 aa10.19□□□□□ -0.78
CAPN3-207ENST00000397200 PGPEP1Q9NXJ5 209 aa10.19□□□□□ -0.78
CAPN3-207ENST00000397200 A4D1N5 150 aa10.18□□□□□ -0.78
CAPN3-207ENST00000397200 TSPAN13O95857 204 aa10.18□□□□□ -0.78
CAPN3-207ENST00000397200 LELP1Q5T871 98 aa10.18□□□□□ -0.78
CAPN3-207ENST00000397200 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
CAPN3-207ENST00000397200 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-207ENST00000397200 APOMO95445 188 aa10.17□□□□□ -0.78
CAPN3-207ENST00000397200 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
CAPN3-207ENST00000397200 ZNF625Q96I27 306 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-207ENST00000397200 LINC00588Q9Y4M8 146 aa10.17□□□□□ -0.78
CAPN3-207ENST00000397200 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-207ENST00000397200 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
CAPN3-207ENST00000397200 UBE2DNLQ8IWF7 75 aa10.16□□□□□ -0.78
CAPN3-207ENST00000397200 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
CAPN3-207ENST00000397200 IFITM1P13164 125 aa10.15□□□□□ -0.78
CAPN3-207ENST00000397200 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
CAPN3-207ENST00000397200 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.78
CAPN3-207ENST00000397200 RBX1P62877 108 aa10.15□□□□□ -0.79
CAPN3-207ENST00000397200 PPDPFQ9H3Y8 114 aa10.15□□□□□ -0.79
CAPN3-207ENST00000397200 Q9H8V8 135 aa10.15□□□□□ -0.79
CAPN3-207ENST00000397200 HERV-K104P63124 156 aa10.14□□□□□ -0.79
CAPN3-207ENST00000397200 A0A087WZ39 114 aa10.13□□□□□ -0.79
CAPN3-207ENST00000397200 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
CAPN3-207ENST00000397200 IGHV3-33P01772 117 aa10.13□□□□□ -0.79
CAPN3-207ENST00000397200 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
CAPN3-207ENST00000397200 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms