RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
MCF2L-205ENST00000397017 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
MCF2L-205ENST00000397017 TRBV6-8A0A0A6YYG3 113 aa10.86□□□□□ -0.67
MCF2L-205ENST00000397017 UBE2D4Q9Y2X8 147 aa10.85□□□□□ -0.67
MCF2L-205ENST00000397017 IGLL5B9A064 214 aa10.85□□□□□ -0.67
MCF2L-205ENST00000397017 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
MCF2L-205ENST00000397017 C11orf45Q8TAV5 145 aa10.85□□□□□ -0.67
MCF2L-205ENST00000397017 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
MCF2L-205ENST00000397017 SIVA1O15304 175 aa10.84□□□□□ -0.67
MCF2L-205ENST00000397017 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
MCF2L-205ENST00000397017 TEX48A0A1B0GUV7 120 aa10.83□□□□□ -0.68
MCF2L-205ENST00000397017 SMIM20Q8N5G0 67 aa10.83□□□□□ -0.68
MCF2L-205ENST00000397017 UBE2D3P61077 147 aa10.83□□□□□ -0.68
MCF2L-205ENST00000397017 UBE2D2P62837 147 aa10.83□□□□□ -0.68
MCF2L-205ENST00000397017 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
MCF2L-205ENST00000397017 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 FHL2Q14192 279 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 SMIM9A6NGZ8 99 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 B5MCH6 92 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
MCF2L-205ENST00000397017 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 IGLV4-60A0A075B6I1 120 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 A0A0J9YWU9 116 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 LYRM9A8MSI8 78 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 PRO1854Q9UHT4 67 aa10.82□□□□□ -0.68
MCF2L-205ENST00000397017 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
MCF2L-205ENST00000397017 MIFP14174 115 aa10.81□□□□□ -0.68
MCF2L-205ENST00000397017 RPL13AP40429 203 aaKnown RBP10.81□□□□□ -0.68
MCF2L-205ENST00000397017 NFE4Q86UQ8 179 aa10.81□□□□□ -0.68
MCF2L-205ENST00000397017 KMT2BQ9UMN6 2715 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-205ENST00000397017 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-205ENST00000397017 ZNF561-AS1K7EIQ3 104 aa10.81□□□□□ -0.68
MCF2L-205ENST00000397017 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
MCF2L-205ENST00000397017 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
MCF2L-205ENST00000397017 DNAL4O96015 105 aa10.8□□□□□ -0.68
MCF2L-205ENST00000397017 HERV-K104P63124 156 aa10.8□□□□□ -0.68
MCF2L-205ENST00000397017 SH2D6Q7Z4S9 175 aa10.8□□□□□ -0.68
MCF2L-205ENST00000397017 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 C9JAW5 83 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 COX6A2Q02221 97 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 Q6ZTC4 211 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 A0A0J9YXY3 114 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
MCF2L-205ENST00000397017 PSCAO43653 123 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 RPL32P62910 135 aaKnown RBP10.78□□□□□ -0.68
MCF2L-205ENST00000397017 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 ANAPC13Q9BS18 74 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-205ENST00000397017 KIR2DL5BQ8NHK3 375 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 COX7A2LO14548 114 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 NTM-AS1Q6ZSK4 140 aa10.78□□□□□ -0.68
MCF2L-205ENST00000397017 TENM1Q9UKZ4 2725 aa10.77□□□□□ -0.68
MCF2L-205ENST00000397017 HIGD2BQ4VC39 106 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 REG3AQ06141 175 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 KPRPQ5T749 579 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-205ENST00000397017 EDA2RQ9HAV5 297 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 C2orf82Q6UX34 121 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 HIGD1BQ9P298 99 aa10.77□□□□□ -0.69
MCF2L-205ENST00000397017 SNCGO76070 127 aa10.76□□□□□ -0.69
MCF2L-205ENST00000397017 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
MCF2L-205ENST00000397017 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
MCF2L-205ENST00000397017 LINC00242Q5T6M2 205 aa10.76□□□□□ -0.69
MCF2L-205ENST00000397017 TAL2Q16559 108 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 CDC42SE2Q9NRR3 84 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 Q8N3U1 123 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 X6R8D5 127 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 C1orf43Q9BWL3 253 aa10.75□□□□□ -0.69
MCF2L-205ENST00000397017 PDZD2O15018 2839 aa10.74□□□□□ -0.69
MCF2L-205ENST00000397017 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-205ENST00000397017 K7EP34 96 aa10.74□□□□□ -0.69
MCF2L-205ENST00000397017 CFC1BP0CG36 223 aa10.74□□□□□ -0.69
MCF2L-205ENST00000397017 CFC1P0CG37 223 aa10.74□□□□□ -0.69
MCF2L-205ENST00000397017 UBE2D1P51668 147 aa10.74□□□□□ -0.69
MCF2L-205ENST00000397017 GAGE2EQ4V326 116 aa10.73□□□□□ -0.69
MCF2L-205ENST00000397017 GAGE2DQ9UEU5 116 aa10.73□□□□□ -0.69
MCF2L-205ENST00000397017 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
MCF2L-205ENST00000397017 VWFP04275 2813 aa10.72□□□□□ -0.69
MCF2L-205ENST00000397017 LECT2O14960 151 aa10.72□□□□□ -0.69
MCF2L-205ENST00000397017 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
MCF2L-205ENST00000397017 RNF183Q96D59 192 aa10.71□□□□□ -0.69
MCF2L-205ENST00000397017 CCL18P55774 89 aa10.71□□□□□ -0.69
MCF2L-205ENST00000397017 SPAG11BQ08648 103 aa10.71□□□□□ -0.69
MCF2L-205ENST00000397017 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.69
MCF2L-205ENST00000397017 MRPS36P82909 103 aaKnown RBP10.71□□□□□ -0.7
MCF2L-205ENST00000397017 WFDC2Q14508 124 aa10.71□□□□□ -0.7
MCF2L-205ENST00000397017 OVOL2Q9BRP0 275 aa10.7□□□□□ -0.7
MCF2L-205ENST00000397017 LINC00959A0A1B0GUT2 108 aa10.7□□□□□ -0.7
MCF2L-205ENST00000397017 CAMK2N2Q96S95 79 aa10.69□□□□□ -0.7
MCF2L-205ENST00000397017 PTH2Q96A98 100 aa10.69□□□□□ -0.7
MCF2L-205ENST00000397017 CSNK1G2-AS1Q8NCQ2 148 aa10.69□□□□□ -0.7
MCF2L-205ENST00000397017 FBN1P35555 2871 aaKnown RBP10.68□□□□□ -0.7
MCF2L-205ENST00000397017 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
MCF2L-205ENST00000397017 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms